Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACNS8M_RS02140 Genome accession   NZ_CP183239
Coordinates   471276..472133 (+) Length   285 a.a.
NCBI ID   WP_171525687.1    Uniprot ID   -
Organism   Acinetobacter sp. A2     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 466276..477133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNS8M_RS02110 (ACNS8M_02090) wrbA 466918..467514 (+) 597 WP_168418546.1 NAD(P)H:quinone oxidoreductase -
  ACNS8M_RS02115 (ACNS8M_02095) - 467805..467996 (+) 192 WP_168418530.1 hypothetical protein -
  ACNS8M_RS02120 (ACNS8M_02100) - 468065..468460 (-) 396 WP_168541444.1 hypothetical protein -
  ACNS8M_RS02125 (ACNS8M_02105) - 468734..469309 (-) 576 WP_168418532.1 xanthine phosphoribosyltransferase -
  ACNS8M_RS02130 (ACNS8M_02110) - 469437..470150 (-) 714 WP_168418533.1 DUF3108 domain-containing protein -
  ACNS8M_RS02135 (ACNS8M_02115) - 470322..471002 (-) 681 WP_168526024.1 hypothetical protein -
  ACNS8M_RS02140 (ACNS8M_02120) tonB2 471276..472133 (+) 858 WP_171525687.1 energy transducer TonB Machinery gene
  ACNS8M_RS02145 (ACNS8M_02125) ybeY 472540..473022 (-) 483 WP_168418536.1 rRNA maturation RNase YbeY -
  ACNS8M_RS02150 (ACNS8M_02130) - 473066..474139 (-) 1074 WP_070155261.1 PhoH family protein -
  ACNS8M_RS02155 (ACNS8M_02135) miaB 474179..475633 (-) 1455 WP_168418537.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 285 a.a.        Molecular weight: 32299.67 Da        Isoelectric Point: 6.2950

>NTDB_id=1104733 ACNS8M_RS02140 WP_171525687.1 471276..472133(+) (tonB2) [Acinetobacter sp. A2]
MPTSQEWWKDPIFAAALLVAAVLHVMILAVQFAAPQQSDAAVKEIAVSVRMSDTKVEDADFLAQADQQGSGTFREEHRMS
SDMPAPMTEQSAGEQQLESLERMQQQRELNFEEKVLMTTLSWQKQAAENQRKKAMQELNSQFQAKAAMVASIEAQYLQRQ
QNFSRQQKIKTIDGIQAKQDNTAGYMEKFRQKVEFYGNRYYPEQAKAQNLAGEVRLMVILNNNGGIRAIRLIESSGHAML
DEAAKASVRKAAPFGAFDAKMKDISELRIVRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 858 bp        

>NTDB_id=1104733 ACNS8M_RS02140 WP_171525687.1 471276..472133(+) (tonB2) [Acinetobacter sp. A2]
ATGCCTACTTCACAAGAGTGGTGGAAAGACCCTATTTTTGCTGCTGCGTTACTCGTGGCTGCTGTGTTGCACGTGATGAT
TTTAGCTGTGCAATTTGCTGCACCACAGCAAAGCGATGCCGCAGTCAAAGAAATTGCGGTATCGGTACGTATGAGTGATA
CAAAAGTTGAAGATGCAGACTTTTTAGCACAGGCCGATCAACAAGGTTCGGGTACTTTCCGAGAAGAACATCGCATGTCT
AGTGACATGCCAGCACCTATGACTGAGCAAAGTGCAGGTGAACAGCAGCTGGAAAGCTTAGAGCGTATGCAGCAACAGCG
TGAATTAAACTTTGAAGAAAAAGTGTTGATGACCACGCTTAGCTGGCAAAAGCAGGCGGCAGAAAATCAGCGTAAAAAAG
CCATGCAGGAATTGAATAGTCAGTTTCAGGCCAAGGCGGCCATGGTTGCAAGTATTGAGGCACAATATTTACAACGCCAA
CAAAACTTTAGCCGTCAGCAAAAAATTAAAACCATTGATGGAATTCAGGCCAAGCAAGACAACACTGCGGGCTATATGGA
AAAATTCCGTCAAAAAGTCGAATTTTACGGTAACCGTTATTATCCTGAACAAGCCAAAGCACAGAATTTGGCTGGCGAAG
TCCGTTTGATGGTGATTTTAAATAACAATGGCGGGATTCGTGCCATTCGTTTAATTGAAAGTTCAGGCCATGCCATGCTG
GATGAAGCAGCGAAGGCTTCGGTGCGTAAGGCCGCACCTTTTGGTGCATTCGATGCGAAAATGAAAGATATTTCTGAATT
ACGGATTGTGCGGACGTGGCGCTTTGACCCTGCCGAAGCTGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(198-275)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

72.043

97.895

0.705

Multiple sequence alignment