Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACNS8M_RS01605 Genome accession   NZ_CP183239
Coordinates   358803..361025 (-) Length   740 a.a.
NCBI ID   WP_419225040.1    Uniprot ID   -
Organism   Acinetobacter sp. A2     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 353803..366025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNS8M_RS01580 (ACNS8M_01560) - 353847..354182 (-) 336 WP_168417556.1 chaperone modulator CbpM -
  ACNS8M_RS01585 (ACNS8M_01565) - 354547..355008 (-) 462 WP_104852969.1 DUF2147 domain-containing protein -
  ACNS8M_RS01590 (ACNS8M_01570) - 355265..355729 (-) 465 WP_168417555.1 DUF2147 domain-containing protein -
  ACNS8M_RS01595 (ACNS8M_01575) - 355962..356837 (-) 876 WP_419225039.1 Hsp33 family molecular chaperone HslO -
  ACNS8M_RS01600 (ACNS8M_01580) - 356888..358729 (-) 1842 WP_104852972.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACNS8M_RS01605 (ACNS8M_01585) priA 358803..361025 (-) 2223 WP_419225040.1 primosomal protein N' Machinery gene
  ACNS8M_RS01610 (ACNS8M_01590) gspF 361177..362382 (+) 1206 WP_419225041.1 type II secretion system inner membrane protein GspF -
  ACNS8M_RS01615 (ACNS8M_01595) gspG 362459..362893 (+) 435 WP_104852975.1 type II secretion system major pseudopilin GspG -
  ACNS8M_RS01620 (ACNS8M_01600) lnt 363028..364584 (-) 1557 WP_168525215.1 apolipoprotein N-acyltransferase -
  ACNS8M_RS01625 (ACNS8M_01605) - 364581..365420 (-) 840 WP_104852977.1 CBS domain-containing protein -
  ACNS8M_RS01630 (ACNS8M_01610) tusA 365620..365877 (+) 258 WP_180060555.1 sulfurtransferase TusA -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83941.26 Da        Isoelectric Point: 8.7640

>NTDB_id=1104732 ACNS8M_RS01605 WP_419225040.1 358803..361025(-) (priA) [Acinetobacter sp. A2]
MPDSTLDPQPIYRIRVAVPVYLYDCFDYMLSAAQYQQAAVGARVLVSFGRQNLVGIIVEKLALDTPINPRFKLKAITELL
DEQAILDAKVLTLLTWASQYYQFPIGEVMHSALPSLLRQAKPYNLLARTWKLLDAQAEAKIKRSEKQQEAYKILKLHPTG
TSENILNLAGIETATLKALASKEICECVLETQDFSPMPVTLAQMPLTPNPDQKKAIDSVLKVRQQYKAFLLDGLTGSGKT
EVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGHLENCPVILGSATPSIDSYALVDQGKMQCLELNQRAGTALMPKIHL
IDLKIAKKQHGISQQLIDEMKKRLAKKEQVLVFLNRRGYAPVLICENCAWQAKCPHCDANFTLHHQPYVHLHCHHCGTIH
RKPEQCPACNHEELKPVGMGTAKVEDSLNELFPDIDVIRVDRDSTSRVGSWQKIYDRIQRSEPLILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQSLRPDHPLLTTLVEGDYRKFAKQSLKERKAAQL
PPYRYTALIRCESKSQELNQQFLQQHAQWLREHSEQLIDIWGPIPAPMERKAGRFQAHMVLLSKDRARLHFYIRNWWQNM
LHEKPSSMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=1104732 ACNS8M_RS01605 WP_419225040.1 358803..361025(-) (priA) [Acinetobacter sp. A2]
ATGCCAGATTCGACTTTAGACCCGCAGCCCATTTACCGTATTCGAGTGGCTGTACCCGTATATCTTTATGACTGCTTCGA
TTACATGCTCAGTGCAGCACAATATCAGCAAGCAGCCGTTGGCGCACGGGTGTTGGTGTCCTTTGGTCGGCAAAACTTGG
TTGGGATTATTGTCGAAAAACTGGCGCTCGACACCCCAATTAACCCACGTTTTAAACTCAAAGCCATTACCGAACTGTTA
GATGAACAAGCGATTTTAGACGCTAAAGTTTTAACTTTGTTGACATGGGCATCACAATATTACCAATTTCCCATTGGTGA
AGTGATGCACAGCGCTTTGCCAAGTTTATTGCGTCAAGCCAAGCCCTATAATTTGCTGGCTCGAACTTGGAAACTGCTAG
ATGCACAGGCCGAGGCTAAAATTAAACGCTCAGAAAAGCAGCAGGAAGCCTATAAAATTTTAAAGCTGCATCCAACGGGT
ACTTCTGAAAATATTTTAAATTTAGCAGGCATTGAAACCGCCACCCTAAAAGCTTTGGCAAGCAAAGAAATTTGCGAATG
TGTTTTGGAAACCCAAGATTTCAGCCCAATGCCTGTCACTTTGGCACAAATGCCTTTAACACCCAATCCCGATCAGAAAA
AAGCCATCGACAGCGTACTTAAAGTTCGGCAGCAATATAAAGCTTTTTTACTAGATGGCTTAACGGGCAGCGGCAAAACT
GAAGTGTATTTGCACATCATGCATGAGGTGCTAAAACAGGGCAAACAAGTGCTGGTGTTAGTCCCAGAAATTGGACTGAC
CCCACAAACCATCAGCCGTTTTCAGTCACGTTTTCACTGCCATATTGCCCTCTTACATTCGGGTTTAAATGATTCGAAAC
GTTTGCAAGCGTGGCAGGCGGCACAAACAGGCAAAGCGTCTATTATTTTAGGCACACGCTCTGCGATTTATACTCCATTG
CCAAATTTGGGCTTGATTATTTTAGATGAAGAACACGACCTGTCTTTTAAACAACAAGAAGGTTTTCGCTATCATGCTCG
AGATGTCGCCCTTTACCGTGGCCATTTGGAAAATTGCCCTGTTATTTTAGGTTCAGCTACACCAAGTATTGACAGTTATG
CCTTGGTCGATCAAGGCAAAATGCAGTGTTTGGAGCTGAATCAACGGGCAGGCACCGCGCTTATGCCTAAAATCCACCTG
ATTGATTTAAAAATTGCCAAAAAACAGCATGGCATCAGTCAACAATTGATTGATGAAATGAAAAAACGTCTGGCAAAAAA
AGAACAAGTCTTGGTGTTTTTAAACCGACGTGGCTATGCCCCAGTCCTGATTTGTGAAAATTGTGCCTGGCAAGCCAAAT
GCCCACATTGTGATGCCAACTTTACCCTGCATCATCAACCTTATGTGCATTTACACTGCCACCATTGCGGAACAATTCAC
CGCAAACCTGAGCAATGCCCTGCCTGCAACCATGAAGAACTCAAACCTGTGGGCATGGGTACCGCCAAAGTGGAAGACAG
TCTAAATGAACTGTTCCCAGATATAGATGTGATTCGGGTAGATCGTGACTCAACCAGTCGTGTCGGCAGCTGGCAAAAAA
TTTATGACCGTATTCAACGCAGTGAACCCCTAATTTTACTGGGCACACAAATGCTGGCCAAAGGACATCACTTTCCTTAT
GTAACCTTGGTGGCTATTTTAGATATCGATTCAGGCTTGCTCAGTGTTGATATTCGCGCACCTGAACGTACCGCCCAACT
GATTGTGCAAGTGGCAGGACGTGCAGGGCGTGGTGAACATAAAGGCGATGTTTATTTGCAAAGTTTACGTCCTGATCATC
CTTTACTCACCACCTTGGTCGAGGGAGATTACCGCAAGTTTGCCAAACAAAGTTTAAAAGAGCGCAAAGCCGCGCAACTG
CCGCCATATCGTTATACTGCGCTGATTCGCTGTGAGTCCAAAAGTCAGGAATTAAACCAACAGTTTTTACAACAACATGC
GCAATGGCTCAGGGAACATTCCGAACAATTAATTGATATTTGGGGGCCTATTCCTGCGCCAATGGAACGTAAGGCAGGTC
GTTTCCAAGCGCACATGGTGCTATTGTCTAAAGATCGGGCGCGCTTACATTTTTATATCAGGAACTGGTGGCAAAATATG
TTGCATGAAAAGCCATCCAGCATGAAACTAAGTTTAGATATAGATCCACAAGAATTTAGCTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(207-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

73.279

100

0.734

Multiple sequence alignment