Detailed information NTG1104714

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACN2AT_RS19380
• Genome accession: NZ_CP183238
• Coordinates: 3735000..3736145 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NDmed
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3730000..3741145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN2AT_RS19355 (ACN2AT_19250)	albF	3730016..3731296 (+)	1281	WP_003242974.1	M16 family metallopeptidase	-
ACN2AT_RS19360 (ACN2AT_19255)	albG	3731293..3731994 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ACN2AT_RS19365 (ACN2AT_19260)	ywhL	3732000..3733376 (-)	1377	WP_003244415.1	YncE family protein	-
ACN2AT_RS19370 (ACN2AT_19265)	ywhK	3733415..3734770 (-)	1356	WP_003227552.1	YncE family protein	-
ACN2AT_RS19375 (ACN2AT_19270)	-	3734767..3734997 (-)	231	WP_009968328.1	hypothetical protein	-
ACN2AT_RS19380 (ACN2AT_19275)	rapF	3735000..3736145 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
ACN2AT_RS19385 (ACN2AT_19280)	phrF	3736129..3736248 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ACN2AT_RS19390 (ACN2AT_19285)	ywhH	3736347..3736820 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
ACN2AT_RS19395 (ACN2AT_19290)	speB	3736852..3737724 (-)	873	WP_003227545.1	agmatinase	-
ACN2AT_RS19400 (ACN2AT_19295)	speE	3737785..3738615 (-)	831	WP_003227543.1	spermidine synthase	-
ACN2AT_RS19405 (ACN2AT_19300)	pbpG	3738817..3740892 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=1104714 ACN2AT_RS19380 WP_003227549.1 3735000..3736145(+) (rapF) [Bacillus subtilis strain NDmed]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1104714 ACN2AT_RS19380 WP_003227549.1 3735000..3736145(+) (rapF) [Bacillus subtilis strain NDmed]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572