Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACAK36_RS10340 | Genome accession | NZ_AP031585 |
| Coordinates | 2112818..2113243 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788346.1 | Uniprot ID | A0A0J8T367 |
| Organism | Acinetobacter baumannii strain JUNP543 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2107818..2118243
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK36_RS10310 (JUNP543_2064) | - | 2108348..2109382 (+) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
| ACAK36_RS10315 (JUNP543_2065) | - | 2109497..2110438 (+) | 942 | WP_085943440.1 | triacylglycerol lipase | - |
| ACAK36_RS10320 (JUNP543_2066) | rplS | 2110490..2110858 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACAK36_RS10325 (JUNP543_2067) | trmD | 2111066..2111806 (-) | 741 | WP_000464596.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACAK36_RS10330 (JUNP543_2068) | rimM | 2111852..2112400 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACAK36_RS10335 (JUNP543_2069) | rpsP | 2112420..2112671 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACAK36_RS10340 (JUNP543_2070) | pilE | 2112818..2113243 (-) | 426 | WP_000788346.1 | type IV pilin protein | Machinery gene |
| ACAK36_RS10345 (JUNP543_2071) | pilY2 | 2113240..2113722 (-) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| ACAK36_RS10350 (JUNP543_2072) | pilY1 | 2113735..2117589 (-) | 3855 | WP_000768950.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15282.50 Da Isoelectric Point: 7.8144
>NTDB_id=110447 ACAK36_RS10340 WP_000788346.1 2112818..2113243(-) (pilE) [Acinetobacter baumannii strain JUNP543]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNTTIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNTTIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=110447 ACAK36_RS10340 WP_000788346.1 2112818..2113243(-) (pilE) [Acinetobacter baumannii strain JUNP543]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCTTCAAATACAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCTTCAAATACAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
99.291 |
100 |
0.993 |
| comF | Acinetobacter baylyi ADP1 |
52.857 |
99.291 |
0.525 |