Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ACNSOB_RS16210 | Genome accession | NZ_CP183064 |
| Coordinates | 3258749..3259363 (-) | Length | 204 a.a. |
| NCBI ID | WP_047501141.1 | Uniprot ID | A0A5A9DFT6 |
| Organism | Citrobacter braakii strain FAHZZU5618 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3248737..3270499 | 3258749..3259363 | within | 0 |
Gene organization within MGE regions
Location: 3248737..3270499
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNSOB_RS16150 (ACNSOB_16120) | - | 3248737..3249747 (+) | 1011 | WP_080221473.1 | tyrosine-type recombinase/integrase | - |
| ACNSOB_RS16160 (ACNSOB_16130) | yccX | 3249980..3250213 (-) | 234 | Protein_3174 | acylphosphatase | - |
| ACNSOB_RS16165 (ACNSOB_16135) | - | 3250227..3250373 (-) | 147 | Protein_3175 | AraC family transcriptional regulator | - |
| ACNSOB_RS16170 (ACNSOB_16140) | rlmI | 3250487..3251698 (+) | 1212 | WP_016156139.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| ACNSOB_RS16175 (ACNSOB_16145) | hspQ | 3251756..3252073 (+) | 318 | WP_016152490.1 | heat shock protein HspQ | - |
| ACNSOB_RS16180 (ACNSOB_16150) | - | 3252141..3252554 (-) | 414 | WP_016152489.1 | CoA-binding protein | - |
| ACNSOB_RS16185 (ACNSOB_16155) | csgI | 3252726..3253388 (+) | 663 | WP_016152488.1 | curli synthesis inhibitor | - |
| ACNSOB_RS16190 (ACNSOB_16160) | mgsA | 3253482..3253940 (+) | 459 | WP_016152487.1 | methylglyoxal synthase | - |
| ACNSOB_RS16195 (ACNSOB_16165) | helD | 3253973..3256027 (-) | 2055 | WP_047359367.1 | DNA helicase IV | - |
| ACNSOB_RS16200 (ACNSOB_16170) | - | 3256153..3256599 (+) | 447 | WP_016152485.1 | YccF domain-containing protein | - |
| ACNSOB_RS16205 (ACNSOB_16175) | yccS | 3256618..3258771 (+) | 2154 | WP_137367148.1 | YccS family putative transporter | - |
| ACNSOB_RS16210 (ACNSOB_16180) | sxy/tfoX | 3258749..3259363 (-) | 615 | WP_047501141.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| ACNSOB_RS16215 (ACNSOB_16185) | sulA | 3259581..3260090 (+) | 510 | WP_019076414.1 | SOS-induced cell division inhibitor SulA | - |
| ACNSOB_RS16220 (ACNSOB_16190) | ompA | 3260448..3261506 (+) | 1059 | WP_016156137.1 | porin OmpA | - |
| ACNSOB_RS16225 (ACNSOB_16195) | matP | 3261605..3262057 (-) | 453 | WP_016152480.1 | macrodomain Ter protein MatP | - |
| ACNSOB_RS16230 (ACNSOB_16200) | - | 3262243..3264003 (+) | 1761 | WP_016156136.1 | AAA family ATPase | - |
| ACNSOB_RS16235 (ACNSOB_16205) | fabA | 3264072..3264590 (+) | 519 | WP_003035875.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| ACNSOB_RS16240 (ACNSOB_16210) | rmf | 3264698..3264865 (-) | 168 | WP_003035871.1 | ribosome modulation factor | - |
| ACNSOB_RS16245 (ACNSOB_16215) | pqiC | 3265124..3265687 (-) | 564 | WP_016152478.1 | membrane integrity-associated transporter subunit PqiC | - |
| ACNSOB_RS16250 (ACNSOB_16220) | pqiB | 3265684..3267324 (-) | 1641 | WP_003836843.1 | intermembrane transport protein PqiB | - |
| ACNSOB_RS16255 (ACNSOB_16225) | pqiA | 3267329..3268576 (-) | 1248 | WP_016152477.1 | membrane integrity-associated transporter subunit PqiA | - |
| ACNSOB_RS16260 (ACNSOB_16230) | - | 3268592..3270499 (-) | 1908 | WP_016152476.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23198.55 Da Isoelectric Point: 8.6113
>NTDB_id=1103942 ACNSOB_RS16210 WP_047501141.1 3258749..3259363(-) (sxy/tfoX) [Citrobacter braakii strain FAHZZU5618]
MKEKSYARIYKSQEYLASLGTIHYRSLFGSYSLTVGDTVFAMVASGELYLRACEQSAQYCVKNSPVWLTFIKRGRPVVLN
YYQVNDTLWQNQQQLVSLSQFSLDAAVKEKQSRFAQHRLRELPNMTFHLETLLNEAGIKDEGTLRSLGAQMCWLKLRQNN
PALTVKILYALEGAVDGVHEAALPATRRQELVEWVSSLTPEPGY
MKEKSYARIYKSQEYLASLGTIHYRSLFGSYSLTVGDTVFAMVASGELYLRACEQSAQYCVKNSPVWLTFIKRGRPVVLN
YYQVNDTLWQNQQQLVSLSQFSLDAAVKEKQSRFAQHRLRELPNMTFHLETLLNEAGIKDEGTLRSLGAQMCWLKLRQNN
PALTVKILYALEGAVDGVHEAALPATRRQELVEWVSSLTPEPGY
Nucleotide
Download Length: 615 bp
>NTDB_id=1103942 ACNSOB_RS16210 WP_047501141.1 3258749..3259363(-) (sxy/tfoX) [Citrobacter braakii strain FAHZZU5618]
ATGAAAGAAAAGTCTTATGCAAGAATCTATAAATCACAAGAATATCTGGCTTCTCTGGGAACAATTCACTACCGCTCACT
GTTTGGCAGCTATAGTCTGACGGTTGGTGATACGGTCTTTGCCATGGTTGCCAGCGGTGAGTTATATCTTCGCGCCTGTG
AGCAGAGCGCCCAGTACTGTGTAAAAAATTCTCCTGTCTGGCTAACATTTATCAAACGCGGACGTCCGGTTGTACTCAAT
TATTACCAGGTGAACGATACCCTGTGGCAGAACCAGCAGCAGTTAGTGTCGCTATCACAATTTTCACTCGATGCAGCCGT
TAAGGAAAAACAGAGTCGCTTTGCACAACATCGCCTGCGGGAATTACCGAATATGACGTTTCATCTGGAGACCTTGCTAA
ATGAAGCAGGAATTAAGGATGAGGGGACATTGCGATCGCTGGGAGCTCAGATGTGCTGGTTGAAACTTCGGCAAAATAAC
CCTGCCTTAACGGTAAAAATACTCTATGCCCTTGAAGGGGCGGTTGACGGGGTGCATGAAGCCGCGCTCCCGGCGACGCG
TCGCCAGGAGCTGGTGGAGTGGGTGAGTTCTCTTACGCCGGAACCGGGGTATTAG
ATGAAAGAAAAGTCTTATGCAAGAATCTATAAATCACAAGAATATCTGGCTTCTCTGGGAACAATTCACTACCGCTCACT
GTTTGGCAGCTATAGTCTGACGGTTGGTGATACGGTCTTTGCCATGGTTGCCAGCGGTGAGTTATATCTTCGCGCCTGTG
AGCAGAGCGCCCAGTACTGTGTAAAAAATTCTCCTGTCTGGCTAACATTTATCAAACGCGGACGTCCGGTTGTACTCAAT
TATTACCAGGTGAACGATACCCTGTGGCAGAACCAGCAGCAGTTAGTGTCGCTATCACAATTTTCACTCGATGCAGCCGT
TAAGGAAAAACAGAGTCGCTTTGCACAACATCGCCTGCGGGAATTACCGAATATGACGTTTCATCTGGAGACCTTGCTAA
ATGAAGCAGGAATTAAGGATGAGGGGACATTGCGATCGCTGGGAGCTCAGATGTGCTGGTTGAAACTTCGGCAAAATAAC
CCTGCCTTAACGGTAAAAATACTCTATGCCCTTGAAGGGGCGGTTGACGGGGTGCATGAAGCCGCGCTCCCGGCGACGCG
TCGCCAGGAGCTGGTGGAGTGGGTGAGTTCTCTTACGCCGGAACCGGGGTATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
69.652 |
98.529 |
0.686 |