Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACNOHD_RS17395 | Genome accession | NZ_CP183060 |
| Coordinates | 3676125..3676640 (+) | Length | 171 a.a. |
| NCBI ID | WP_418644134.1 | Uniprot ID | - |
| Organism | Stutzerimonas kunmingensis strain L4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3671125..3681640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNOHD_RS17370 (ACNOHD_17370) | speA | 3671144..3673057 (-) | 1914 | WP_003302177.1 | arginine decarboxylase | - |
| ACNOHD_RS17375 (ACNOHD_17375) | - | 3673181..3673552 (-) | 372 | WP_256075995.1 | translation initiation factor Sui1 | - |
| ACNOHD_RS17380 (ACNOHD_17380) | thiO | 3673701..3674810 (-) | 1110 | WP_418644133.1 | glycine oxidase ThiO | - |
| ACNOHD_RS17385 (ACNOHD_17385) | - | 3674941..3675441 (+) | 501 | WP_418643336.1 | GspH/FimT family pseudopilin | - |
| ACNOHD_RS17390 (ACNOHD_17390) | - | 3675625..3676119 (+) | 495 | WP_418643337.1 | GspH/FimT family pseudopilin | - |
| ACNOHD_RS17395 (ACNOHD_17395) | pilV | 3676125..3676640 (+) | 516 | WP_418644134.1 | type IV pilus modification protein PilV | Machinery gene |
| ACNOHD_RS17400 (ACNOHD_17400) | - | 3676649..3677476 (+) | 828 | WP_418643338.1 | PilW family protein | - |
| ACNOHD_RS17405 (ACNOHD_17405) | - | 3677473..3677991 (+) | 519 | WP_418643339.1 | pilus assembly PilX family protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18447.26 Da Isoelectric Point: 6.2392
>NTDB_id=1103912 ACNOHD_RS17395 WP_418644134.1 3676125..3676640(+) (pilV) [Stutzerimonas kunmingensis strain L4]
MNKRPDKRCSSGFSMIEVLVTLVLISIGVLGMVALQARTIQYTQDAVQRNTAAMLANDLVELMRAMPDEITGFYNAAGAT
FPDLPATGCTPLPAKAVDQLSCWAEKAKTGLPGASDLLTSDFYICRTATANTCSGAGNAIEIQLAWRVKQGVCENSGDDK
TICYYRLRTQI
MNKRPDKRCSSGFSMIEVLVTLVLISIGVLGMVALQARTIQYTQDAVQRNTAAMLANDLVELMRAMPDEITGFYNAAGAT
FPDLPATGCTPLPAKAVDQLSCWAEKAKTGLPGASDLLTSDFYICRTATANTCSGAGNAIEIQLAWRVKQGVCENSGDDK
TICYYRLRTQI
Nucleotide
Download Length: 516 bp
>NTDB_id=1103912 ACNOHD_RS17395 WP_418644134.1 3676125..3676640(+) (pilV) [Stutzerimonas kunmingensis strain L4]
ATGAATAAAAGGCCAGACAAACGTTGCTCGTCGGGCTTCAGCATGATCGAAGTACTGGTCACCCTCGTTCTAATCAGCAT
CGGCGTACTGGGAATGGTCGCCCTACAAGCTCGCACAATCCAGTACACGCAGGACGCCGTACAACGCAACACCGCCGCCA
TGCTGGCCAACGACCTGGTGGAACTGATGCGTGCCATGCCTGATGAGATAACCGGCTTTTACAACGCCGCAGGCGCAACC
TTCCCAGACCTGCCCGCCACAGGCTGTACGCCTTTACCCGCCAAGGCAGTTGACCAACTGAGCTGCTGGGCTGAGAAAGC
CAAAACCGGCCTGCCCGGCGCCAGTGATCTGCTGACCAGCGACTTCTATATCTGCCGTACAGCCACTGCTAACACCTGCA
GCGGAGCCGGCAACGCCATCGAAATCCAGCTCGCATGGCGCGTCAAGCAGGGCGTATGTGAGAACTCTGGCGACGACAAG
ACAATCTGCTACTACCGCCTGCGCACCCAGATATAG
ATGAATAAAAGGCCAGACAAACGTTGCTCGTCGGGCTTCAGCATGATCGAAGTACTGGTCACCCTCGTTCTAATCAGCAT
CGGCGTACTGGGAATGGTCGCCCTACAAGCTCGCACAATCCAGTACACGCAGGACGCCGTACAACGCAACACCGCCGCCA
TGCTGGCCAACGACCTGGTGGAACTGATGCGTGCCATGCCTGATGAGATAACCGGCTTTTACAACGCCGCAGGCGCAACC
TTCCCAGACCTGCCCGCCACAGGCTGTACGCCTTTACCCGCCAAGGCAGTTGACCAACTGAGCTGCTGGGCTGAGAAAGC
CAAAACCGGCCTGCCCGGCGCCAGTGATCTGCTGACCAGCGACTTCTATATCTGCCGTACAGCCACTGCTAACACCTGCA
GCGGAGCCGGCAACGCCATCGAAATCCAGCTCGCATGGCGCGTCAAGCAGGGCGTATGTGAGAACTCTGGCGACGACAAG
ACAATCTGCTACTACCGCCTGCGCACCCAGATATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
53.757 |
100 |
0.544 |