Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACNMOO_RS21400 Genome accession   NZ_CP183050
Coordinates   4402410..4403006 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain CRhvKp09     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4397410..4408006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNMOO_RS21380 (ACNMOO_21365) - 4397602..4399359 (-) 1758 WP_020804925.1 AAA family ATPase -
  ACNMOO_RS21385 (ACNMOO_21370) matP 4399545..4399997 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACNMOO_RS21390 (ACNMOO_21375) ompA 4400129..4401199 (-) 1071 WP_002898408.1 porin OmpA -
  ACNMOO_RS21395 (ACNMOO_21380) sulA 4401552..4402061 (-) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  ACNMOO_RS21400 (ACNMOO_21385) sxy/tfoX 4402410..4403006 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACNMOO_RS21405 (ACNMOO_21390) yccS 4403020..4405155 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACNMOO_RS21410 (ACNMOO_21395) - 4405173..4405619 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACNMOO_RS21415 (ACNMOO_21400) helD 4405744..4407798 (+) 2055 WP_004176653.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1103889 ACNMOO_RS21400 WP_004179217.1 4402410..4403006(+) (sxy/tfoX) [Klebsiella pneumoniae strain CRhvKp09]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1103889 ACNMOO_RS21400 WP_004179217.1 4402410..4403006(+) (sxy/tfoX) [Klebsiella pneumoniae strain CRhvKp09]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment