Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | HV97_RS29510 | Genome accession | NZ_CP008870 |
| Coordinates | 6195857..6196453 (-) | Length | 198 a.a. |
| NCBI ID | WP_003095839.1 | Uniprot ID | G3XD30 |
| Organism | Pseudomonas aeruginosa strain W36662 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6190857..6201453
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV97_RS29490 (HV97_25800) | aroK | 6191988..6192506 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| HV97_RS29495 (HV97_25805) | pilQ | 6192518..6194662 (-) | 2145 | WP_023087871.1 | type 4a pilus secretin PilQ | Machinery gene |
| HV97_RS29500 (HV97_25810) | comL/pilP | 6194716..6195240 (-) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| HV97_RS29505 (HV97_25815) | pilO | 6195237..6195860 (-) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| HV97_RS29510 (HV97_25820) | pilN | 6195857..6196453 (-) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| HV97_RS29515 (HV97_25825) | pilM | 6196453..6197517 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| HV97_RS29520 (HV97_25830) | - | 6197702..6200173 (+) | 2472 | WP_016562439.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22213.55 Da Isoelectric Point: 10.0895
>NTDB_id=110384 HV97_RS29510 WP_003095839.1 6195857..6196453(-) (pilN) [Pseudomonas aeruginosa strain W36662]
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
Nucleotide
Download Length: 597 bp
>NTDB_id=110384 HV97_RS29510 WP_003095839.1 6195857..6196453(-) (pilN) [Pseudomonas aeruginosa strain W36662]
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGTTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTAGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAGGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGTTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTAGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAGGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
41.714 |
88.384 |
0.369 |