Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACNM7T_RS07340 Genome accession   NZ_CP183041
Coordinates   1396423..1396887 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus amyloliquefaciens strain Scm     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1391423..1401887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNM7T_RS07320 (ACNM7T_07320) - 1391904..1393724 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  ACNM7T_RS07325 (ACNM7T_07325) - 1393705..1394918 (-) 1214 Protein_1384 aminotransferase A -
  ACNM7T_RS07330 (ACNM7T_07330) - 1395119..1395280 (-) 162 WP_007409608.1 hypothetical protein -
  ACNM7T_RS07335 (ACNM7T_07335) cheV 1395469..1396380 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  ACNM7T_RS07340 (ACNM7T_07340) kre 1396423..1396887 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACNM7T_RS07345 (ACNM7T_07345) - 1397010..1398302 (-) 1293 WP_015239757.1 MFS transporter -
  ACNM7T_RS07350 (ACNM7T_07350) - 1398378..1398872 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  ACNM7T_RS07355 (ACNM7T_07355) - 1398947..1399810 (-) 864 WP_038463786.1 metallophosphoesterase -
  ACNM7T_RS07360 (ACNM7T_07360) fadH 1399955..1400719 (+) 765 WP_038463789.1 2,4-dienoyl-CoA reductase -
  ACNM7T_RS07365 (ACNM7T_07365) - 1400858..1401379 (+) 522 WP_100001409.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1103779 ACNM7T_RS07340 WP_003154622.1 1396423..1396887(-) (kre) [Bacillus amyloliquefaciens strain Scm]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1103779 ACNM7T_RS07340 WP_003154622.1 1396423..1396887(-) (kre) [Bacillus amyloliquefaciens strain Scm]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment