Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACAK34_RS10370 | Genome accession | NZ_AP031582 |
| Coordinates | 2143845..2144225 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836909.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain JUNP499 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2138845..2149225
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK34_RS10340 (JUNP499_2074) | tadA | 2138964..2139467 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ACAK34_RS10345 (JUNP499_2075) | - | 2139474..2140598 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACAK34_RS10350 (JUNP499_2076) | ung | 2140595..2141308 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ACAK34_RS10355 (JUNP499_2077) | - | 2141359..2141955 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ACAK34_RS10360 (JUNP499_2078) | gspK | 2142185..2143144 (-) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| ACAK34_RS10365 (JUNP499_2079) | xcpW | 2143144..2143845 (-) | 702 | WP_000594588.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACAK34_RS10370 (JUNP499_2080) | xcpV | 2143845..2144225 (-) | 381 | WP_000836909.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACAK34_RS10375 (JUNP499_2081) | - | 2144215..2144769 (-) | 555 | WP_000841372.1 | type II secretion system protein | - |
| ACAK34_RS10380 (JUNP499_2082) | - | 2144779..2145387 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACAK34_RS10385 (JUNP499_2083) | - | 2145425..2146198 (-) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| ACAK34_RS10390 (JUNP499_2084) | - | 2146216..2146557 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACAK34_RS10395 (JUNP499_2085) | - | 2146569..2147549 (-) | 981 | WP_001075419.1 | DNA polymerase III subunit delta' | - |
| ACAK34_RS10400 (JUNP499_2086) | kdsB | 2147561..2148322 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=110366 ACAK34_RS10370 WP_000836909.1 2143845..2144225(-) (xcpV) [Acinetobacter baumannii strain JUNP499]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=110366 ACAK34_RS10370 WP_000836909.1 2143845..2144225(-) (xcpV) [Acinetobacter baumannii strain JUNP499]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |