Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACNSN8_RS16700 Genome accession   NZ_CP182939
Coordinates   3398520..3399143 (-) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain FAHZZU6419     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3393520..3404143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNSN8_RS16685 (ACNSN8_16660) helD 3393755..3395809 (-) 2055 WP_048228616.1 DNA helicase IV -
  ACNSN8_RS16690 (ACNSN8_16665) - 3395933..3396379 (+) 447 WP_047056215.1 YccF domain-containing protein -
  ACNSN8_RS16695 (ACNSN8_16670) yccS 3396397..3398532 (+) 2136 WP_015367427.1 YccS family putative transporter -
  ACNSN8_RS16700 (ACNSN8_16675) sxy/tfoX 3398520..3399143 (-) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  ACNSN8_RS16705 (ACNSN8_16680) sulA 3399593..3400102 (+) 510 WP_048228615.1 SOS-induced cell division inhibitor SulA -
  ACNSN8_RS16710 (ACNSN8_16685) ompA 3400455..3401507 (+) 1053 WP_015704908.1 porin OmpA -
  ACNSN8_RS16715 (ACNSN8_16690) matP 3401599..3402051 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  ACNSN8_RS16720 (ACNSN8_16695) - 3402237..3403994 (+) 1758 WP_048228614.1 AAA family ATPase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=1103359 ACNSN8_RS16700 WP_026612357.1 3398520..3399143(-) (sxy/tfoX) [Klebsiella aerogenes strain FAHZZU6419]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=1103359 ACNSN8_RS16700 WP_026612357.1 3398520..3399143(-) (sxy/tfoX) [Klebsiella aerogenes strain FAHZZU6419]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment