Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACNMOP_RS08480 Genome accession   NZ_CP182885
Coordinates   1703422..1704018 (+) Length   198 a.a.
NCBI ID   WP_102007271.1    Uniprot ID   -
Organism   Klebsiella pneumoniae strain CRE50     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1698422..1709018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNMOP_RS08460 (ACNMOP_08455) - 1698614..1700371 (-) 1758 WP_032414743.1 AAA family ATPase -
  ACNMOP_RS08465 (ACNMOP_08460) matP 1700557..1701009 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACNMOP_RS08470 (ACNMOP_08465) ompA 1701141..1702211 (-) 1071 WP_002898408.1 porin OmpA -
  ACNMOP_RS08475 (ACNMOP_08470) sulA 1702564..1703073 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACNMOP_RS08480 (ACNMOP_08475) sxy/tfoX 1703422..1704018 (+) 597 WP_102007271.1 TfoX/Sxy family DNA transformation protein Regulator
  ACNMOP_RS08485 (ACNMOP_08480) yccS 1704032..1706167 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACNMOP_RS08490 (ACNMOP_08485) - 1706185..1706631 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACNMOP_RS08495 (ACNMOP_08490) helD 1706756..1708810 (+) 2055 WP_032103554.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22606.18 Da        Isoelectric Point: 9.9391

>NTDB_id=1103227 ACNMOP_RS08480 WP_102007271.1 1703422..1704018(+) (sxy/tfoX) [Klebsiella pneumoniae strain CRE50]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRWASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1103227 ACNMOP_RS08480 WP_102007271.1 1703422..1704018(+) (sxy/tfoX) [Klebsiella pneumoniae strain CRE50]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGATGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment