Detailed information NTG1103163

Bioinformatically predicted

Overview

• Name: uvrC
• Type: Machinery gene
• Locus tag: ACNSOK_RS00010
• Genome accession: NZ_CP182877
• Coordinates: 1135..2976 (+)
• Length: 613 a.a.
• NCBI ID: WP_418186803.1
• Uniprot ID: -
• Organism: Aliarcobacter lanthieri strain BNI-4365
• Function: integration of short DNA fragment (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1..7976

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNSOK_RS00010 (ACNSOK_00010)	uvrC	1135..2976 (+)	1842	WP_418186803.1	excinuclease ABC subunit UvrC	Machinery gene
ACNSOK_RS00015 (ACNSOK_00015)	-	2979..4001 (+)	1023	WP_417895535.1	alanine racemase	-
ACNSOK_RS00020 (ACNSOK_00020)	-	4111..6396 (+)	2286	WP_417895534.1	methyl-accepting chemotaxis protein	-
ACNSOK_RS00025 (ACNSOK_00025)	-	6415..7542 (-)	1128	WP_418186804.1	iron-containing alcohol dehydrogenase	-

Sequence

Protein

• Length: 613 a.a.
• Molecular weight: 72060.23 Da
• Isoelectric Point: 8.1531

>NTDB_id=1103163 ACNSOK_RS00010 WP_418186803.1 1135..2976(+) (uvrC) [Aliarcobacter lanthieri strain BNI-4365]
MILEEKLKELPNDAGVYQYFDKEGHLLYIGKAKVLKNRVKSYFKFTPKLLPADKLSPRIYKMICEVENLEWIVVPNEHDA
LILENSLIKQLKPKYNILLRDDKTYPYIFIDYNDDFPRLEITRKIQKGKNIKYFGPYSSGARDMLDSIYEIVPLVQKKSC
IKGKNACLFYQIERCLAPCENKISKEDYSKIVENALEYIYNKTKLISKLKEKMKIYSDDFRFEDAMNLRDRIKTIEKSQI
KTGIDLATNEDIDIFAINSNDKKAVIVRMFLRDGKLTSSNYDFIKINDDLEFDYEEAYKRAIINYYDNELPLLPKEILIA
HELLELDDIEEFLYTKFNKKIKIVNPKKDKKREIINIALNNCNELLRLEEAKNQTTIYEELKELFTLKTLPYLIESFDNS
HLMGQATVGAMIVWNEELNSFDKKAFRHYNLESKDEYSQMREMLIRRVESFEKNPAPDLWIIDGGETLLKLAYDIVQSVG
VNLDIIAIAKEKIDAKAHRAKGSAKDIIHYKDSNGEFKNFNLLTSDKRLQFVQRQRDEAHRFVINFHKKQKRTQDKQISL
LQIKGIGEAKIKKLLLYFGEFDKIKNASFEELKSVLNEKDANTILDYFNDFKD

Nucleotide

• Length: 1842 bp

>NTDB_id=1103163 ACNSOK_RS00010 WP_418186803.1 1135..2976(+) (uvrC) [Aliarcobacter lanthieri strain BNI-4365]
ATGATTTTAGAAGAGAAATTAAAAGAGTTACCAAATGATGCTGGAGTTTATCAATACTTTGATAAAGAAGGACATCTACT
ATATATTGGAAAAGCAAAAGTTTTAAAAAATAGAGTTAAATCTTACTTTAAATTTACTCCAAAACTATTACCAGCAGATA
AACTAAGCCCTCGTATTTATAAAATGATTTGTGAAGTTGAAAATTTGGAATGGATAGTTGTACCAAATGAACATGATGCA
CTTATATTAGAAAATTCTTTAATAAAACAATTAAAACCAAAATACAATATCTTACTTCGTGATGATAAAACATATCCATA
TATTTTCATAGATTATAATGATGATTTTCCAAGGTTAGAAATAACAAGAAAAATACAAAAAGGAAAAAATATAAAATATT
TTGGTCCTTATTCAAGTGGAGCAAGAGATATGCTTGATAGTATCTATGAAATAGTTCCTTTAGTACAAAAGAAATCATGT
ATCAAAGGGAAAAATGCATGTTTATTTTATCAAATAGAAAGATGTTTAGCTCCTTGTGAGAATAAAATTTCAAAGGAAGA
TTATTCAAAAATAGTTGAAAATGCTTTAGAATATATCTACAATAAAACTAAACTTATTTCTAAATTAAAAGAAAAAATGA
AAATTTATTCTGATGATTTTCGTTTTGAAGATGCTATGAACTTAAGAGATAGAATAAAAACCATTGAGAAATCTCAAATA
AAAACTGGAATAGACCTCGCTACAAATGAAGATATTGATATTTTTGCAATAAACTCAAATGATAAAAAAGCTGTGATTGT
AAGAATGTTTTTAAGAGATGGAAAACTTACATCTTCAAATTATGATTTTATAAAAATAAATGATGATTTAGAATTTGATT
ATGAAGAAGCATATAAAAGAGCTATTATAAACTACTATGATAATGAACTTCCCCTTTTACCAAAAGAGATTTTAATAGCA
CATGAGCTTTTAGAATTAGATGATATTGAAGAATTTTTATATACAAAATTTAATAAAAAAATAAAAATAGTAAATCCTAA
AAAAGATAAAAAAAGAGAGATTATAAATATTGCACTAAATAACTGTAATGAACTTCTAAGACTAGAAGAAGCAAAAAATC
AAACAACAATTTATGAAGAGTTAAAAGAGCTATTTACTCTTAAAACTTTACCATATCTTATTGAAAGCTTTGATAATTCT
CATCTTATGGGACAAGCAACAGTTGGTGCAATGATTGTTTGGAATGAAGAGTTAAATTCTTTTGATAAAAAAGCTTTTAG
ACACTACAATCTTGAATCAAAAGATGAATATTCACAAATGAGAGAAATGCTAATAAGAAGAGTTGAAAGTTTTGAAAAAA
ATCCAGCACCAGATTTATGGATAATTGATGGAGGTGAAACTTTACTAAAATTAGCTTATGATATAGTTCAAAGTGTTGGA
GTAAATCTTGATATTATAGCTATTGCAAAAGAAAAAATAGATGCAAAAGCACATAGAGCAAAAGGAAGTGCAAAAGATAT
AATTCACTATAAAGATTCAAATGGTGAATTTAAAAATTTTAATTTACTTACCAGTGATAAAAGACTACAATTCGTTCAAA
GACAAAGAGATGAAGCACACAGATTTGTAATAAATTTCCATAAGAAACAAAAAAGAACTCAAGATAAACAGATATCATTA
CTTCAAATAAAAGGTATTGGTGAAGCAAAGATTAAAAAACTTCTTTTATATTTTGGAGAATTTGATAAGATAAAAAATGC
TTCTTTTGAAGAGTTAAAAAGTGTATTAAATGAAAAAGATGCAAATACAATTTTAGATTATTTTAATGATTTCAAGGATT
AA

Domains

Predicted by InterproScan.

• UvrC RNAse H endonuclease domain (UvrC_RNaseH_dom) (382-544)

• UvrB/uvrC motif (UVR) (204-237)

• GIY-YIG catalytic domain (GIY-YIG) (15-96)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrC	Helicobacter pylori 26695	52.421	97.716	0.512