Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HV97_RS02600 | Genome accession | NZ_CP008870 |
| Coordinates | 557224..557589 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain W36662 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 552224..562589
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV97_RS02570 (HV97_31040) | pyrR | 552846..553358 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HV97_RS02575 (HV97_31045) | ruvX | 553470..553904 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HV97_RS02580 (HV97_31050) | - | 553904..554473 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| HV97_RS02585 (HV97_31055) | - | 554522..555415 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| HV97_RS02590 (HV97_31060) | gshB | 555562..556515 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HV97_RS02595 (HV97_31065) | pilG | 556770..557177 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HV97_RS02600 (HV97_31070) | pilH | 557224..557589 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HV97_RS02605 (HV97_31075) | - | 557640..558176 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HV97_RS02610 (HV97_31080) | pilJ | 558261..560309 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| HV97_RS02615 (HV97_31085) | pilK | 560370..561245 (+) | 876 | WP_023086908.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=110306 HV97_RS02600 WP_003084587.1 557224..557589(+) (pilH) [Pseudomonas aeruginosa strain W36662]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=110306 HV97_RS02600 WP_003084587.1 557224..557589(+) (pilH) [Pseudomonas aeruginosa strain W36662]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |