Detailed information NTG0110274

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK32_RS09325
• Genome accession: NZ_AP031580
• Coordinates: 1913064..1913765 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain JUNP419
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1908064..1918765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK32_RS09290 (JUNP419_1868)	kdsB	1908587..1909348 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACAK32_RS09295 (JUNP419_1869)	-	1909360..1910340 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACAK32_RS09300 (JUNP419_1870)	-	1910352..1910693 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACAK32_RS09305 (JUNP419_1871)	-	1910711..1911484 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACAK32_RS09310 (JUNP419_1872)	-	1911522..1912130 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK32_RS09315 (JUNP419_1873)	-	1912140..1912694 (+)	555	WP_000841373.1	type II secretion system protein	-
ACAK32_RS09320 (JUNP419_1874)	xcpV	1912684..1913064 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK32_RS09325 (JUNP419_1875)	xcpW	1913064..1913765 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK32_RS09330 (JUNP419_1876)	gspK	1913765..1914724 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACAK32_RS09335 (JUNP419_1877)	-	1914955..1915551 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACAK32_RS09340 (JUNP419_1878)	ung	1915602..1916315 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACAK32_RS09345 (JUNP419_1879)	-	1916312..1917436 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK32_RS09350 (JUNP419_1880)	tadA	1917443..1917946 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACAK32_RS09355 (JUNP419_1881)	-	1918016..1918459 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=110274 ACAK32_RS09325 WP_000594589.1 1913064..1913765(+) (xcpW) [Acinetobacter baumannii strain JUNP419]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110274 ACAK32_RS09325 WP_000594589.1 1913064..1913765(+) (xcpW) [Acinetobacter baumannii strain JUNP419]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996