Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACM641_RS02105 Genome accession   NZ_CP182815
Coordinates   401858..402808 (+) Length   316 a.a.
NCBI ID   WP_025117536.1    Uniprot ID   A0A0P7N2K8
Organism   Lysinibacillus fusiformis strain A15     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 396858..407808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM641_RS02085 - 397383..398528 (+) 1146 WP_025117540.1 M20 peptidase aminoacylase family protein -
  ACM641_RS02090 - 398528..399352 (+) 825 WP_418301974.1 GNAT family N-acetyltransferase -
  ACM641_RS02095 menC 399374..400480 (+) 1107 WP_418301975.1 o-succinylbenzoate synthase -
  ACM641_RS02100 - 400521..401573 (+) 1053 WP_025117537.1 membrane protein -
  ACM641_RS02105 ceuB 401858..402808 (+) 951 WP_025117536.1 ABC transporter permease Machinery gene
  ACM641_RS02110 - 402801..403754 (+) 954 WP_025117535.1 iron chelate uptake ABC transporter family permease subunit -
  ACM641_RS02115 - 403751..404512 (+) 762 WP_008175175.1 ABC transporter ATP-binding protein -
  ACM641_RS02120 - 404578..405597 (+) 1020 WP_418301976.1 siderophore ABC transporter substrate-binding protein -
  ACM641_RS02125 - 405599..405913 (+) 315 WP_008175171.1 antibiotic biosynthesis monooxygenase family protein -
  ACM641_RS02130 - 406017..406556 (-) 540 WP_418301977.1 hypothetical protein -
  ACM641_RS02135 - 406896..407798 (+) 903 WP_418301978.1 polyprenyl synthetase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34779.95 Da        Isoelectric Point: 10.1462

>NTDB_id=1102532 ACM641_RS02105 WP_025117536.1 401858..402808(+) (ceuB) [Lysinibacillus fusiformis strain A15]
MKIRYLLTATVVLSIVSLFIGVVDIKPSDLLDFQSEETRLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGVLISMMFFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMYGNILSSVTTFFAYKANII
QNISAWLQGDFSLIMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGV
IPFLGLIIPNIISLFKGDNLAKTLPHTALLGMSFLLFCDILGRVLIFPYEIPISMTVGVIGSAIFLVMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1102532 ACM641_RS02105 WP_025117536.1 401858..402808(+) (ceuB) [Lysinibacillus fusiformis strain A15]
ATGAAAATAAGATATCTTTTAACAGCAACTGTTGTGTTGTCTATAGTATCGCTATTTATAGGAGTAGTAGATATTAAACC
AAGTGATCTATTAGACTTCCAATCAGAAGAAACTAGACTATTTTTAATTAGTCGTGTACCTAGACTTGTTGCGATTTTGC
TAGCAGGTGCGGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTATCACCAACGACAGCA
GGTACTTTAGATGCAACTCGACTGGGTGTATTGATTTCCATGATGTTTTTCACAAATGTCACGTATTTCCAAAAAATTTC
CTTCGCTTTCATATTTGCTCTAGCCGGCACATTATTATTTATGCAAATATTAAATCGAATTAAGTTTAAAGATGCGATTT
TTATACCGCTTATTGGCTTAATGTATGGTAATATCTTGTCTTCCGTAACAACGTTCTTTGCTTATAAGGCAAATATTATC
CAAAACATTTCTGCATGGTTACAAGGAGATTTCTCATTAATCATGAAAGGCCGTTATGAACTGTTATACATAAGTGTACC
AGTACTTATTTTAGCTTATATTTATGCCAATCGTTTTACAGTAGCCGGTATGGGTGAGGATTTTGCCAAAAATCTTGGTC
TATCCTATAAGTTTGTGGTCAATTTAGGCTTAGTATTGGTGGCTCTTATCTCCACAACAGTGGTGCTAACAGTTGGTGTC
ATTCCATTCCTTGGCTTGATCATACCGAATATTATTTCACTGTTTAAAGGTGATAATTTGGCAAAAACATTGCCGCATAC
AGCATTACTTGGTATGTCATTCTTATTATTCTGCGATATTTTAGGACGCGTACTGATTTTCCCTTATGAGATACCAATTA
GTATGACTGTTGGTGTAATTGGAAGTGCCATCTTCCTAGTTATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0P7N2K8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment