Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ACNIRT_RS07745 | Genome accession | NZ_CP182629 |
| Coordinates | 1639801..1640406 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain N24-1008-GF4 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1606200..1648666 | 1639801..1640406 | within | 0 |
Gene organization within MGE regions
Location: 1606200..1648666
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNIRT_RS07615 (ACNIRT_07615) | ldtD | 1606240..1608087 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| ACNIRT_RS07620 (ACNIRT_07620) | - | 1608347..1608895 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| ACNIRT_RS07625 (ACNIRT_07625) | - | 1608923..1609570 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| ACNIRT_RS07630 (ACNIRT_07630) | - | 1609668..1610923 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| ACNIRT_RS07635 (ACNIRT_07635) | aspC | 1610947..1612137 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| ACNIRT_RS07640 (ACNIRT_07640) | ompF | 1612322..1613413 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| ACNIRT_RS07645 (ACNIRT_07645) | asnS | 1614020..1615420 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| ACNIRT_RS07650 (ACNIRT_07650) | - | 1615621..1616082 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| ACNIRT_RS07655 (ACNIRT_07655) | dpaL | 1616399..1617613 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| ACNIRT_RS07660 (ACNIRT_07660) | - | 1617859..1619292 (+) | 1434 | WP_000893191.1 | alanine/glycine:cation symporter family protein | - |
| ACNIRT_RS07665 (ACNIRT_07665) | pncB | 1619373..1620575 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| ACNIRT_RS07670 (ACNIRT_07670) | pepN | 1620842..1623454 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| ACNIRT_RS07675 (ACNIRT_07675) | pyrD | 1623662..1624672 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| ACNIRT_RS07680 (ACNIRT_07680) | zapC | 1624838..1625380 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| ACNIRT_RS07685 (ACNIRT_07685) | - | 1625377..1626486 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| ACNIRT_RS07690 (ACNIRT_07690) | rlmKL | 1626585..1628693 (+) | 2109 | WP_023993509.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| ACNIRT_RS07695 (ACNIRT_07695) | - | 1628706..1630613 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| ACNIRT_RS07700 (ACNIRT_07700) | pqiA | 1630628..1631881 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| ACNIRT_RS07705 (ACNIRT_07705) | pqiB | 1631886..1633526 (+) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| ACNIRT_RS07710 (ACNIRT_07710) | pqiC | 1633523..1634086 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| ACNIRT_RS07715 (ACNIRT_07715) | rmf | 1634342..1634509 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| ACNIRT_RS07720 (ACNIRT_07720) | fabA | 1634609..1635127 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| ACNIRT_RS07725 (ACNIRT_07725) | - | 1635196..1636956 (-) | 1761 | WP_000156457.1 | AAA family ATPase | - |
| ACNIRT_RS07730 (ACNIRT_07730) | matP | 1637142..1637594 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| ACNIRT_RS07735 (ACNIRT_07735) | ompA | 1637666..1638718 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| ACNIRT_RS07740 (ACNIRT_07740) | sulA | 1639075..1639584 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| ACNIRT_RS07745 (ACNIRT_07745) | sxy/tfoX | 1639801..1640406 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| ACNIRT_RS07750 (ACNIRT_07750) | yccS | 1640393..1642546 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| ACNIRT_RS07755 (ACNIRT_07755) | - | 1642565..1643011 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| ACNIRT_RS07760 (ACNIRT_07760) | helD | 1643135..1645189 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| ACNIRT_RS07765 (ACNIRT_07765) | mgsA | 1645225..1645683 (-) | 459 | WP_023993505.1 | methylglyoxal synthase | - |
| ACNIRT_RS07770 (ACNIRT_07770) | - | 1645778..1646440 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| ACNIRT_RS07775 (ACNIRT_07775) | - | 1646614..1647027 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| ACNIRT_RS07780 (ACNIRT_07780) | hspQ | 1647072..1647389 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| ACNIRT_RS07785 (ACNIRT_07785) | rlmI | 1647447..1648658 (-) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=1102493 ACNIRT_RS07745 WP_001202375.1 1639801..1640406(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1008-GF4]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=1102493 ACNIRT_RS07745 WP_001202375.1 1639801..1640406(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1008-GF4]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |