Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ACNLFN_RS07735 | Genome accession | NZ_CP182626 |
| Coordinates | 1638473..1639078 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain N24-1044-GF8 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1604872..1647338 | 1638473..1639078 | within | 0 |
Gene organization within MGE regions
Location: 1604872..1647338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNLFN_RS07605 (ACNLFN_07605) | ldtD | 1604912..1606759 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| ACNLFN_RS07610 (ACNLFN_07610) | - | 1607019..1607567 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| ACNLFN_RS07615 (ACNLFN_07615) | - | 1607595..1608242 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| ACNLFN_RS07620 (ACNLFN_07620) | - | 1608340..1609595 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| ACNLFN_RS07625 (ACNLFN_07625) | aspC | 1609619..1610809 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| ACNLFN_RS07630 (ACNLFN_07630) | ompF | 1610994..1612085 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| ACNLFN_RS07635 (ACNLFN_07635) | asnS | 1612692..1614092 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| ACNLFN_RS07640 (ACNLFN_07640) | - | 1614293..1614754 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| ACNLFN_RS07645 (ACNLFN_07645) | dpaL | 1615071..1616285 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| ACNLFN_RS07650 (ACNLFN_07650) | - | 1616531..1617964 (+) | 1434 | WP_000893191.1 | alanine/glycine:cation symporter family protein | - |
| ACNLFN_RS07655 (ACNLFN_07655) | pncB | 1618045..1619247 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| ACNLFN_RS07660 (ACNLFN_07660) | pepN | 1619514..1622126 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| ACNLFN_RS07665 (ACNLFN_07665) | pyrD | 1622334..1623344 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| ACNLFN_RS07670 (ACNLFN_07670) | zapC | 1623510..1624052 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| ACNLFN_RS07675 (ACNLFN_07675) | - | 1624049..1625158 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| ACNLFN_RS07680 (ACNLFN_07680) | rlmKL | 1625257..1627365 (+) | 2109 | WP_023993509.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| ACNLFN_RS07685 (ACNLFN_07685) | - | 1627378..1629285 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| ACNLFN_RS07690 (ACNLFN_07690) | pqiA | 1629300..1630553 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| ACNLFN_RS07695 (ACNLFN_07695) | pqiB | 1630558..1632198 (+) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| ACNLFN_RS07700 (ACNLFN_07700) | pqiC | 1632195..1632758 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| ACNLFN_RS07705 (ACNLFN_07705) | rmf | 1633014..1633181 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| ACNLFN_RS07710 (ACNLFN_07710) | fabA | 1633281..1633799 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| ACNLFN_RS07715 (ACNLFN_07715) | - | 1633868..1635628 (-) | 1761 | WP_000156457.1 | AAA family ATPase | - |
| ACNLFN_RS07720 (ACNLFN_07720) | matP | 1635814..1636266 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| ACNLFN_RS07725 (ACNLFN_07725) | ompA | 1636338..1637390 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| ACNLFN_RS07730 (ACNLFN_07730) | sulA | 1637747..1638256 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| ACNLFN_RS07735 (ACNLFN_07735) | sxy/tfoX | 1638473..1639078 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| ACNLFN_RS07740 (ACNLFN_07740) | yccS | 1639065..1641218 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| ACNLFN_RS07745 (ACNLFN_07745) | - | 1641237..1641683 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| ACNLFN_RS07750 (ACNLFN_07750) | helD | 1641807..1643861 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| ACNLFN_RS07755 (ACNLFN_07755) | mgsA | 1643897..1644355 (-) | 459 | WP_023993505.1 | methylglyoxal synthase | - |
| ACNLFN_RS07760 (ACNLFN_07760) | - | 1644450..1645112 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| ACNLFN_RS07765 (ACNLFN_07765) | - | 1645286..1645699 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| ACNLFN_RS07770 (ACNLFN_07770) | hspQ | 1645744..1646061 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| ACNLFN_RS07775 (ACNLFN_07775) | rlmI | 1646119..1647330 (-) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=1102471 ACNLFN_RS07735 WP_001202375.1 1638473..1639078(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1044-GF8]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=1102471 ACNLFN_RS07735 WP_001202375.1 1638473..1639078(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1044-GF8]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |