Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ACNLFP_RS07735 | Genome accession | NZ_CP182623 |
| Coordinates | 1639569..1640174 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain N24-1392-GF152 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1605968..1648434 | 1639569..1640174 | within | 0 |
Gene organization within MGE regions
Location: 1605968..1648434
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNLFP_RS07605 (ACNLFP_07605) | ldtD | 1606008..1607855 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| ACNLFP_RS07610 (ACNLFP_07610) | - | 1608115..1608663 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| ACNLFP_RS07615 (ACNLFP_07615) | - | 1608691..1609338 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| ACNLFP_RS07620 (ACNLFP_07620) | - | 1609436..1610691 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| ACNLFP_RS07625 (ACNLFP_07625) | aspC | 1610715..1611905 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| ACNLFP_RS07630 (ACNLFP_07630) | ompF | 1612090..1613181 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| ACNLFP_RS07635 (ACNLFP_07635) | asnS | 1613788..1615188 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| ACNLFP_RS07640 (ACNLFP_07640) | - | 1615389..1615850 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| ACNLFP_RS07645 (ACNLFP_07645) | dpaL | 1616167..1617381 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| ACNLFP_RS07650 (ACNLFP_07650) | - | 1617627..1619060 (+) | 1434 | WP_000893191.1 | alanine/glycine:cation symporter family protein | - |
| ACNLFP_RS07655 (ACNLFP_07655) | pncB | 1619141..1620343 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| ACNLFP_RS07660 (ACNLFP_07660) | pepN | 1620610..1623222 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| ACNLFP_RS07665 (ACNLFP_07665) | pyrD | 1623430..1624440 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| ACNLFP_RS07670 (ACNLFP_07670) | zapC | 1624606..1625148 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| ACNLFP_RS07675 (ACNLFP_07675) | - | 1625145..1626254 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| ACNLFP_RS07680 (ACNLFP_07680) | rlmKL | 1626353..1628461 (+) | 2109 | WP_023993509.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| ACNLFP_RS07685 (ACNLFP_07685) | - | 1628474..1630381 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| ACNLFP_RS07690 (ACNLFP_07690) | pqiA | 1630396..1631649 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| ACNLFP_RS07695 (ACNLFP_07695) | pqiB | 1631654..1633294 (+) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| ACNLFP_RS07700 (ACNLFP_07700) | pqiC | 1633291..1633854 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| ACNLFP_RS07705 (ACNLFP_07705) | rmf | 1634110..1634277 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| ACNLFP_RS07710 (ACNLFP_07710) | fabA | 1634377..1634895 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| ACNLFP_RS07715 (ACNLFP_07715) | - | 1634964..1636724 (-) | 1761 | WP_000156457.1 | AAA family ATPase | - |
| ACNLFP_RS07720 (ACNLFP_07720) | matP | 1636910..1637362 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| ACNLFP_RS07725 (ACNLFP_07725) | ompA | 1637434..1638486 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| ACNLFP_RS07730 (ACNLFP_07730) | sulA | 1638843..1639352 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| ACNLFP_RS07735 (ACNLFP_07735) | sxy/tfoX | 1639569..1640174 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| ACNLFP_RS07740 (ACNLFP_07740) | yccS | 1640161..1642314 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| ACNLFP_RS07745 (ACNLFP_07745) | - | 1642333..1642779 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| ACNLFP_RS07750 (ACNLFP_07750) | helD | 1642903..1644957 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| ACNLFP_RS07755 (ACNLFP_07755) | mgsA | 1644993..1645451 (-) | 459 | WP_023993505.1 | methylglyoxal synthase | - |
| ACNLFP_RS07760 (ACNLFP_07760) | - | 1645546..1646208 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| ACNLFP_RS07765 (ACNLFP_07765) | - | 1646382..1646795 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| ACNLFP_RS07770 (ACNLFP_07770) | hspQ | 1646840..1647157 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| ACNLFP_RS07775 (ACNLFP_07775) | rlmI | 1647215..1648426 (-) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=1102449 ACNLFP_RS07735 WP_001202375.1 1639569..1640174(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1392-GF152]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=1102449 ACNLFP_RS07735 WP_001202375.1 1639569..1640174(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1392-GF152]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |