Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ACNLFL_RS07745 | Genome accession | NZ_CP182619 |
| Coordinates | 1638370..1638975 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain N24-1393-GF161 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1604769..1647235 | 1638370..1638975 | within | 0 |
Gene organization within MGE regions
Location: 1604769..1647235
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNLFL_RS07615 (ACNLFL_07615) | ldtD | 1604809..1606656 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| ACNLFL_RS07620 (ACNLFL_07620) | - | 1606916..1607464 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| ACNLFL_RS07625 (ACNLFL_07625) | - | 1607492..1608139 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| ACNLFL_RS07630 (ACNLFL_07630) | - | 1608237..1609492 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| ACNLFL_RS07635 (ACNLFL_07635) | aspC | 1609516..1610706 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| ACNLFL_RS07640 (ACNLFL_07640) | ompF | 1610891..1611982 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| ACNLFL_RS07645 (ACNLFL_07645) | asnS | 1612589..1613989 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| ACNLFL_RS07650 (ACNLFL_07650) | - | 1614190..1614651 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| ACNLFL_RS07655 (ACNLFL_07655) | dpaL | 1614968..1616182 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| ACNLFL_RS07660 (ACNLFL_07660) | - | 1616428..1617861 (+) | 1434 | WP_000893191.1 | alanine/glycine:cation symporter family protein | - |
| ACNLFL_RS07665 (ACNLFL_07665) | pncB | 1617942..1619144 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| ACNLFL_RS07670 (ACNLFL_07670) | pepN | 1619411..1622023 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| ACNLFL_RS07675 (ACNLFL_07675) | pyrD | 1622231..1623241 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| ACNLFL_RS07680 (ACNLFL_07680) | zapC | 1623407..1623949 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| ACNLFL_RS07685 (ACNLFL_07685) | - | 1623946..1625055 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| ACNLFL_RS07690 (ACNLFL_07690) | rlmKL | 1625154..1627262 (+) | 2109 | WP_023993509.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| ACNLFL_RS07695 (ACNLFL_07695) | - | 1627275..1629182 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| ACNLFL_RS07700 (ACNLFL_07700) | pqiA | 1629197..1630450 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| ACNLFL_RS07705 (ACNLFL_07705) | pqiB | 1630455..1632095 (+) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| ACNLFL_RS07710 (ACNLFL_07710) | pqiC | 1632092..1632655 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| ACNLFL_RS07715 (ACNLFL_07715) | rmf | 1632911..1633078 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| ACNLFL_RS07720 (ACNLFL_07720) | fabA | 1633178..1633696 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| ACNLFL_RS07725 (ACNLFL_07725) | - | 1633765..1635525 (-) | 1761 | WP_000156457.1 | AAA family ATPase | - |
| ACNLFL_RS07730 (ACNLFL_07730) | matP | 1635711..1636163 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| ACNLFL_RS07735 (ACNLFL_07735) | ompA | 1636235..1637287 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| ACNLFL_RS07740 (ACNLFL_07740) | sulA | 1637644..1638153 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| ACNLFL_RS07745 (ACNLFL_07745) | sxy/tfoX | 1638370..1638975 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| ACNLFL_RS07750 (ACNLFL_07750) | yccS | 1638962..1641115 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| ACNLFL_RS07755 (ACNLFL_07755) | - | 1641134..1641580 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| ACNLFL_RS07760 (ACNLFL_07760) | helD | 1641704..1643758 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| ACNLFL_RS07765 (ACNLFL_07765) | mgsA | 1643794..1644252 (-) | 459 | WP_023993505.1 | methylglyoxal synthase | - |
| ACNLFL_RS07770 (ACNLFL_07770) | - | 1644347..1645009 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| ACNLFL_RS07775 (ACNLFL_07775) | - | 1645183..1645596 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| ACNLFL_RS07780 (ACNLFL_07780) | hspQ | 1645641..1645958 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| ACNLFL_RS07785 (ACNLFL_07785) | rlmI | 1646016..1647227 (-) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=1102427 ACNLFL_RS07745 WP_001202375.1 1638370..1638975(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1393-GF161]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=1102427 ACNLFL_RS07745 WP_001202375.1 1638370..1638975(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain N24-1393-GF161]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |