Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ACAK30_RS17420 | Genome accession | NZ_AP031579 |
| Coordinates | 3643051..3643578 (-) | Length | 175 a.a. |
| NCBI ID | WP_024436689.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain JUNP406 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3638051..3648578
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK30_RS17400 (JUNP406_3466) | - | 3638240..3639115 (-) | 876 | WP_000218799.1 | hypothetical protein | - |
| ACAK30_RS17405 (JUNP406_3467) | aroB | 3639131..3640213 (-) | 1083 | WP_001193999.1 | 3-dehydroquinate synthase | - |
| ACAK30_RS17410 (JUNP406_3468) | aroK | 3640242..3640811 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| ACAK30_RS17415 (JUNP406_3469) | pilQ | 3640823..3642988 (-) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ACAK30_RS17420 (JUNP406_3470) | pilP | 3643051..3643578 (-) | 528 | WP_024436689.1 | pilus assembly protein PilP | Machinery gene |
| ACAK30_RS17425 (JUNP406_3471) | pilO | 3643589..3644329 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACAK30_RS17430 (JUNP406_3472) | pilN | 3644326..3644967 (-) | 642 | WP_000201226.1 | PilN domain-containing protein | Machinery gene |
| ACAK30_RS17435 (JUNP406_3473) | pilM | 3644967..3646025 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19433.66 Da Isoelectric Point: 8.9898
>NTDB_id=110242 ACAK30_RS17420 WP_024436689.1 3643051..3643578(-) (pilP) [Acinetobacter baumannii strain JUNP406]
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=110242 ACAK30_RS17420 WP_024436689.1 3643051..3643578(-) (pilP) [Acinetobacter baumannii strain JUNP406]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCGCAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCTCTTGAAGCTTTAAATATGAAAGGGAGCATGCG
AAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCGCAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCTCTTGAAGCTTTAAATATGAAAGGGAGCATGCG
AAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
99.429 |
100 |
0.994 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |