Detailed information NTG0110225

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK30_RS08895
• Genome accession: NZ_AP031579
• Coordinates: 1863090..1863791 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain JUNP406
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1858090..1868791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK30_RS08860 (JUNP406_1762)	kdsB	1858613..1859374 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACAK30_RS08865 (JUNP406_1763)	-	1859386..1860366 (+)	981	WP_004747384.1	DNA polymerase III, delta' subunit	-
ACAK30_RS08870 (JUNP406_1764)	-	1860378..1860719 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACAK30_RS08875 (JUNP406_1765)	-	1860737..1861510 (+)	774	WP_000497302.1	TatD family hydrolase	-
ACAK30_RS08880 (JUNP406_1766)	-	1861548..1862156 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK30_RS08885 (JUNP406_1767)	-	1862166..1862720 (+)	555	WP_000841371.1	type II secretion system protein	-
ACAK30_RS08890 (JUNP406_1768)	xcpV	1862710..1863090 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK30_RS08895 (JUNP406_1769)	xcpW	1863090..1863791 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK30_RS08900 (JUNP406_1770)	gspK	1863791..1864750 (+)	960	WP_004747379.1	type II secretion system minor pseudopilin GspK	-
ACAK30_RS08905 (JUNP406_1771)	-	1864980..1865576 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
ACAK30_RS08910 (JUNP406_1772)	ung	1865627..1866340 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
ACAK30_RS08915 (JUNP406_1773)	-	1866337..1867461 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK30_RS08920 (JUNP406_1774)	tadA	1867468..1867971 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACAK30_RS08925 (JUNP406_1775)	-	1868041..1868484 (+)	444	WP_004747375.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=110225 ACAK30_RS08895 WP_004747380.1 1863090..1863791(+) (xcpW) [Acinetobacter baumannii strain JUNP406]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110225 ACAK30_RS08895 WP_004747380.1 1863090..1863791(+) (xcpW) [Acinetobacter baumannii strain JUNP406]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996