Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HV98_RS02145 | Genome accession | NZ_CP008869 |
| Coordinates | 445405..445770 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain W16407 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 440405..450770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV98_RS02115 (HV98_26350) | pyrR | 441027..441539 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HV98_RS02120 (HV98_26345) | ruvX | 441651..442085 (-) | 435 | WP_003121753.1 | Holliday junction resolvase RuvX | - |
| HV98_RS02125 (HV98_26340) | - | 442085..442654 (-) | 570 | WP_010793542.1 | YqgE/AlgH family protein | - |
| HV98_RS02130 (HV98_26335) | - | 442703..443596 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| HV98_RS02135 (HV98_26330) | gshB | 443743..444696 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HV98_RS02140 (HV98_26325) | pilG | 444951..445358 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HV98_RS02145 (HV98_26320) | pilH | 445405..445770 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HV98_RS02150 (HV98_26315) | - | 445821..446357 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HV98_RS02155 (HV98_26310) | pilJ | 446442..448490 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| HV98_RS02160 (HV98_26305) | pilK | 448551..449426 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=110205 HV98_RS02145 WP_003084587.1 445405..445770(+) (pilH) [Pseudomonas aeruginosa strain W16407]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=110205 HV98_RS02145 WP_003084587.1 445405..445770(+) (pilH) [Pseudomonas aeruginosa strain W16407]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |