Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACNFKJ_RS02620 Genome accession   NZ_CP182514
Coordinates   505878..506921 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain subspecie aureus F-182     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 500878..511921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNFKJ_RS02590 - 501299..502555 (-) 1257 WP_001793983.1 aminopeptidase -
  ACNFKJ_RS02595 - 502558..502758 (-) 201 WP_000180460.1 DUF1128 family protein -
  ACNFKJ_RS02600 - 502905..503369 (+) 465 WP_061843272.1 low molecular weight protein-tyrosine-phosphatase -
  ACNFKJ_RS02605 - 503376..503651 (+) 276 WP_070002542.1 YtxH domain-containing protein -
  ACNFKJ_RS02610 - 503929..505146 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  ACNFKJ_RS02615 vraR 505259..505888 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACNFKJ_RS02620 vraS 505878..506921 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACNFKJ_RS02625 liaF 506918..507619 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACNFKJ_RS02630 - 507634..508020 (-) 387 WP_001110178.1 hypothetical protein -
  ACNFKJ_RS02635 map 508237..508995 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  ACNFKJ_RS02640 - 509751..510737 (+) 987 WP_001014423.1 FUSC family protein -
  ACNFKJ_RS02645 - 510865..511320 (-) 456 WP_102695924.1 hypothetical protein -
  ACNFKJ_RS02650 - 511349..511459 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1101796 ACNFKJ_RS02620 WP_001017131.1 505878..506921(-) (vraS) [Staphylococcus aureus strain subspecie aureus F-182]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1101796 ACNFKJ_RS02620 WP_001017131.1 505878..506921(-) (vraS) [Staphylococcus aureus strain subspecie aureus F-182]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGACTT
ATACCATACACTTGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment