Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACNFKH_RS06330 Genome accession   NZ_CP182513
Coordinates   1225058..1225999 (+) Length   313 a.a.
NCBI ID   WP_418120985.1    Uniprot ID   -
Organism   Campylobacter jejuni strain AS-83-79     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1220058..1230999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNFKH_RS06305 cdsA 1220967..1221692 (-) 726 WP_002882703.1 phosphatidate cytidylyltransferase -
  ACNFKH_RS06310 - 1221701..1222039 (-) 339 WP_002852397.1 hypothetical protein -
  ACNFKH_RS06315 - 1222041..1223348 (-) 1308 WP_002882702.1 NFACT RNA binding domain-containing protein -
  ACNFKH_RS06320 mobA 1223411..1223986 (+) 576 WP_002853737.1 molybdenum cofactor guanylyltransferase -
  ACNFKH_RS06325 pldA 1223983..1224972 (+) 990 WP_002882701.1 phospholipase A -
  ACNFKH_RS06330 ceuB 1225058..1225999 (+) 942 WP_418120985.1 ABC transporter permease Machinery gene
  ACNFKH_RS06335 ceuC 1225992..1226930 (+) 939 WP_002882699.1 iron chelate uptake ABC transporter family permease subunit -
  ACNFKH_RS06340 ceuD 1226927..1227682 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  ACNFKH_RS06345 ceuB 1227695..1228687 (+) 993 WP_002882697.1 enterochelin ABC transporter substrate-binding protein CeuB -
  ACNFKH_RS06355 - 1228913..1229467 (-) 555 WP_002882696.1 membrane protein -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34515.18 Da        Isoelectric Point: 9.6678

>NTDB_id=1101767 ACNFKH_RS06330 WP_418120985.1 1225058..1225999(+) (ceuB) [Campylobacter jejuni strain AS-83-79]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSVGIIPF
LGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKAYA

Nucleotide


Download         Length: 942 bp        

>NTDB_id=1101767 ACNFKH_RS06330 WP_418120985.1 1225058..1225999(+) (ceuB) [Campylobacter jejuni strain AS-83-79]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTACTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCGTTGGAATTATCCCTTTT
TTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAGAAAAAATCTTATCTATATAGCACTTTG
TGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTCCTTTTGAAATGCCTTTAAGTATCACTA
CAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCTTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

96.584

100

0.994

Multiple sequence alignment