Detailed information NTG1101571

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNJYK_RS23625
• Genome accession: NZ_CP182417
• Coordinates: 5194352..5195572 (+)
• Length: 406 a.a.
• NCBI ID: WP_016454145.1
• Uniprot ID: A0A7T2YY92
• Organism: Delftia tsuruhatensis strain Dt1S33
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5189352..5200572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNJYK_RS23605 (ACNJYK_23605)	coaD	5190122..5190622 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
ACNJYK_RS23610 (ACNJYK_23610)	rsmD	5190753..5191460 (-)	708	WP_016449073.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACNJYK_RS23615 (ACNJYK_23615)	-	5191457..5192818 (-)	1362	WP_046985885.1	M16 family metallopeptidase	-
ACNJYK_RS23620 (ACNJYK_23620)	-	5192845..5194323 (-)	1479	WP_034366071.1	M16 family metallopeptidase	-
ACNJYK_RS23625 (ACNJYK_23625)	pilA	5194352..5195572 (+)	1221	WP_016454145.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNJYK_RS23630 (ACNJYK_23630)	-	5196505..5197242 (+)	738	WP_223275154.1	GntR family transcriptional regulator	-
ACNJYK_RS23635 (ACNJYK_23635)	-	5197587..5198714 (+)	1128	WP_082145145.1	hypothetical protein	-
ACNJYK_RS23640 (ACNJYK_23640)	-	5198725..5199696 (+)	972	WP_416820207.1	hypothetical protein	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42489.36 Da
• Isoelectric Point: 5.5295

>NTDB_id=1101571 ACNJYK_RS23625 WP_016454145.1 5194352..5195572(+) (pilA) [Delftia tsuruhatensis strain Dt1S33]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGNSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTELRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=1101571 ACNJYK_RS23625 WP_016454145.1 5194352..5195572(+) (pilA) [Delftia tsuruhatensis strain Dt1S33]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACACCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAACAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGAACTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCTGCAGCCGTCAAGGCCCTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAAGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

3D structure

• AlphaFold DB: A0A7T2YY92

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.991	100	0.5