Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HV99_RS09670 | Genome accession | NZ_CP008868 |
| Coordinates | 2107505..2107870 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain T63266 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2102505..2112870
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV99_RS09640 (HV99_09635) | pyrR | 2103127..2103639 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HV99_RS09645 (HV99_09640) | ruvX | 2103751..2104185 (-) | 435 | WP_023098361.1 | Holliday junction resolvase RuvX | - |
| HV99_RS09650 (HV99_09645) | - | 2104185..2104754 (-) | 570 | WP_059318933.1 | YqgE/AlgH family protein | - |
| HV99_RS09655 (HV99_09650) | - | 2104803..2105696 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| HV99_RS09660 (HV99_09655) | gshB | 2105843..2106796 (-) | 954 | WP_003162014.1 | glutathione synthase | - |
| HV99_RS09665 (HV99_09660) | pilG | 2107051..2107458 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HV99_RS09670 (HV99_09665) | pilH | 2107505..2107870 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HV99_RS09675 (HV99_09670) | - | 2107921..2108457 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HV99_RS09680 (HV99_09675) | pilJ | 2108542..2110590 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| HV99_RS09685 (HV99_09680) | pilK | 2110651..2111526 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=110150 HV99_RS09670 WP_003084587.1 2107505..2107870(+) (pilH) [Pseudomonas aeruginosa strain T63266]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=110150 HV99_RS09670 WP_003084587.1 2107505..2107870(+) (pilH) [Pseudomonas aeruginosa strain T63266]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |