Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | ACNI24_RS03110 | Genome accession | NZ_CP182355 |
| Coordinates | 622795..623175 (-) | Length | 126 a.a. |
| NCBI ID | WP_129089104.1 | Uniprot ID | A0A4Q1AH98 |
| Organism | MAG: Halarcobacter sp. isolate PCE-3 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 617795..628175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNI24_RS03085 (ACNI24_03085) | rimO | 618585..619949 (-) | 1365 | WP_419774495.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| ACNI24_RS03090 (ACNI24_03090) | - | 620104..620541 (+) | 438 | WP_419774496.1 | META domain-containing protein | - |
| ACNI24_RS03095 (ACNI24_03095) | panC | 620560..621381 (-) | 822 | WP_419774497.1 | pantoate--beta-alanine ligase | - |
| ACNI24_RS03100 (ACNI24_03100) | - | 621450..622409 (-) | 960 | WP_419774498.1 | ABC transporter permease | - |
| ACNI24_RS03105 (ACNI24_03105) | acpS | 622439..622789 (+) | 351 | WP_419774499.1 | holo-ACP synthase | - |
| ACNI24_RS03110 (ACNI24_03110) | dprB | 622795..623175 (-) | 381 | WP_129089104.1 | Holliday junction resolvase RuvX | Machinery gene |
| ACNI24_RS03115 (ACNI24_03115) | serB | 623242..623862 (+) | 621 | WP_417328303.1 | phosphoserine phosphatase SerB | - |
| ACNI24_RS03120 (ACNI24_03120) | - | 623984..624985 (+) | 1002 | WP_419774500.1 | transaldolase | - |
| ACNI24_RS03125 (ACNI24_03125) | - | 625079..626434 (+) | 1356 | WP_375153736.1 | class II 3-deoxy-7-phosphoheptulonate synthase | - |
| ACNI24_RS03130 (ACNI24_03130) | - | 626452..626697 (-) | 246 | WP_419774501.1 | arsenate reductase family protein | - |
| ACNI24_RS03135 (ACNI24_03135) | gatC | 626802..627092 (-) | 291 | WP_129084953.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| ACNI24_RS03140 (ACNI24_03140) | - | 627406..627603 (+) | 198 | WP_129084952.1 | hypothetical protein | - |
| ACNI24_RS03145 (ACNI24_03145) | - | 627668..628105 (+) | 438 | WP_417328302.1 | prepilin peptidase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14397.77 Da Isoelectric Point: 5.9208
>NTDB_id=1101359 ACNI24_RS03110 WP_129089104.1 622795..623175(-) (dprB) [MAG: Halarcobacter sp. isolate PCE-3]
MKLCCIDIGLKRIGLAICLQGDIVTPLPAILRKNRNQASNDVLKTLNEWEIDTLIVGYPSASEDMQKRIKHFVNLLDFDK
EVIFQEENMSSIEAEDLMKGDIKYKRDGRVDSLAAKIILERYLSKN
MKLCCIDIGLKRIGLAICLQGDIVTPLPAILRKNRNQASNDVLKTLNEWEIDTLIVGYPSASEDMQKRIKHFVNLLDFDK
EVIFQEENMSSIEAEDLMKGDIKYKRDGRVDSLAAKIILERYLSKN
Nucleotide
Download Length: 381 bp
>NTDB_id=1101359 ACNI24_RS03110 WP_129089104.1 622795..623175(-) (dprB) [MAG: Halarcobacter sp. isolate PCE-3]
TTGAAGCTTTGTTGTATTGATATTGGACTTAAAAGAATAGGACTTGCAATTTGCCTACAAGGGGACATTGTTACACCTCT
TCCTGCAATATTAAGAAAAAATAGAAATCAAGCTTCAAATGATGTTTTAAAAACTTTAAATGAGTGGGAAATTGATACTT
TAATTGTTGGCTATCCTAGTGCAAGTGAAGATATGCAAAAAAGAATTAAGCACTTTGTAAATCTACTTGATTTTGACAAA
GAAGTTATCTTTCAAGAAGAGAATATGAGTTCAATAGAAGCAGAAGATTTGATGAAAGGTGACATCAAATATAAAAGAGA
CGGTAGAGTTGACTCCCTTGCTGCTAAAATTATATTAGAAAGATACCTTAGTAAGAACTAA
TTGAAGCTTTGTTGTATTGATATTGGACTTAAAAGAATAGGACTTGCAATTTGCCTACAAGGGGACATTGTTACACCTCT
TCCTGCAATATTAAGAAAAAATAGAAATCAAGCTTCAAATGATGTTTTAAAAACTTTAAATGAGTGGGAAATTGATACTT
TAATTGTTGGCTATCCTAGTGCAAGTGAAGATATGCAAAAAAGAATTAAGCACTTTGTAAATCTACTTGATTTTGACAAA
GAAGTTATCTTTCAAGAAGAGAATATGAGTTCAATAGAAGCAGAAGATTTGATGAAAGGTGACATCAAATATAAAAGAGA
CGGTAGAGTTGACTCCCTTGCTGCTAAAATTATATTAGAAAGATACCTTAGTAAGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
51.908 |
100 |
0.54 |