Detailed information NTG1101322

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNI20_RS05250
• Genome accession: NZ_CP182349
• Coordinates: 1056422..1057351 (+)
• Length: 309 a.a.
• NCBI ID: WP_419798535.1
• Uniprot ID: -
• Organism: MAG: Terasakiella sp. isolate LRMN1-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1051422..1062351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNI20_RS05220 (ACNI20_05220)	panC	1051844..1052680 (+)	837	WP_419798529.1	pantoate--beta-alanine ligase	-
ACNI20_RS05225 (ACNI20_05225)	-	1052942..1053232 (+)	291	WP_419798530.1	hypothetical protein	-
ACNI20_RS05230 (ACNI20_05230)	-	1053245..1053892 (+)	648	WP_419798531.1	ferredoxin	-
ACNI20_RS05235 (ACNI20_05235)	-	1053904..1054248 (-)	345	WP_419798532.1	hypothetical protein	-
ACNI20_RS05240 (ACNI20_05240)	dapF	1054326..1055171 (+)	846	WP_419799993.1	diaminopimelate epimerase	-
ACNI20_RS05245 (ACNI20_05245)	mtaB	1055122..1056429 (+)	1308	WP_419798534.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	-
ACNI20_RS05250 (ACNI20_05250)	pilA	1056422..1057351 (+)	930	WP_419798535.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNI20_RS05255 (ACNI20_05255)	-	1057348..1057800 (-)	453	WP_419798536.1	GNAT family N-acetyltransferase	-
ACNI20_RS05260 (ACNI20_05260)	-	1057874..1058755 (-)	882	WP_419798537.1	3-hydroxybutyryl-CoA dehydrogenase	-
ACNI20_RS05265 (ACNI20_05265)	-	1058810..1059739 (-)	930	WP_419798538.1	electron transfer flavoprotein subunit alpha/FixB family protein	-
ACNI20_RS05270 (ACNI20_05270)	-	1059741..1060490 (-)	750	WP_419798539.1	electron transfer flavoprotein subunit beta/FixA family protein	-
ACNI20_RS05275 (ACNI20_05275)	-	1060665..1061228 (-)	564	WP_419798540.1	cob(I)yrinic acid a,c-diamide adenosyltransferase	-

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 32734.54 Da
• Isoelectric Point: 5.4754

>NTDB_id=1101322 ACNI20_RS05250 WP_419798535.1 1056422..1057351(+) (pilA) [MAG: Terasakiella sp. isolate LRMN1-2]
MTEKKGWLSRLKAGLSKSSNKLTSGIGDIFTKRKLDDEALEELEDLLITSDMGISTAAKIVQGIAKSRFGKDISSEELKA
ALADEIVPILEPVTKPLDVQTGRKPHVVLVCGVNGSGKTTTIGKLAKIYSDQGLKVMLAAGDTFRAAAVEQLKVWGERTN
VPVIAKETGADAAALAYDAVAQAQADGCDVLLIDTAGRLQNKAHLMDELEKVVRVIKKVDETAPHDTVLVLDSTVGQNAH
SQVETFDKIVNVTGLIVTKLDGTAKGGVTVSLAERFGKPVHAIGVGEAAEDLRPFEARAFANALVGLDD

Nucleotide

• Length: 930 bp

>NTDB_id=1101322 ACNI20_RS05250 WP_419798535.1 1056422..1057351(+) (pilA) [MAG: Terasakiella sp. isolate LRMN1-2]
ATGACTGAAAAAAAAGGCTGGTTATCCCGTCTTAAAGCGGGCTTGAGCAAATCTTCCAATAAATTGACAAGCGGGATTGG
TGATATTTTCACCAAACGCAAGCTGGATGACGAGGCACTGGAAGAACTGGAAGACCTGCTCATTACCTCTGACATGGGGA
TTTCGACCGCCGCTAAAATCGTTCAGGGCATTGCGAAAAGCCGTTTTGGCAAAGATATCTCCAGCGAAGAATTAAAGGCT
GCTTTGGCAGATGAGATCGTCCCTATTCTCGAACCCGTCACAAAGCCGCTGGATGTGCAAACCGGGCGTAAGCCCCATGT
GGTTTTGGTCTGTGGGGTGAATGGTTCGGGCAAAACCACCACCATCGGCAAACTTGCTAAAATCTATAGCGACCAAGGGC
TGAAAGTCATGCTGGCAGCGGGCGATACCTTCCGCGCAGCTGCCGTTGAACAGCTGAAAGTCTGGGGGGAGCGCACAAAC
GTGCCCGTTATTGCCAAGGAAACGGGTGCCGATGCCGCCGCCCTTGCCTATGATGCGGTGGCACAGGCACAGGCGGATGG
CTGCGATGTCCTGTTAATCGATACCGCAGGACGCCTGCAAAACAAGGCACATTTGATGGATGAACTGGAAAAGGTTGTGC
GCGTTATCAAAAAGGTCGATGAAACCGCTCCGCATGATACGGTCTTGGTCTTGGACTCCACAGTCGGCCAAAACGCTCAT
TCTCAAGTAGAAACCTTTGATAAAATCGTCAATGTCACCGGCCTGATCGTGACCAAACTGGACGGCACCGCCAAAGGCGG
CGTGACGGTGTCTTTGGCAGAACGTTTCGGCAAACCCGTCCATGCCATCGGTGTGGGCGAGGCCGCCGAAGACCTGCGCC
CCTTCGAAGCCCGCGCGTTTGCCAATGCACTTGTGGGACTGGACGATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (105-305)

• SRP54-type protein, helical bundle domain (SRP54_N) (22-86)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.508	98.706	0.489