Detailed information NTG1101312

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNI26_RS02275
• Genome accession: NZ_CP182348
• Coordinates: 467975..468904 (+)
• Length: 309 a.a.
• NCBI ID: WP_419798535.1
• Uniprot ID: -
• Organism: MAG: Terasakiella sp. isolate LRMN1-isolate
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 462975..473904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNI26_RS02245 (ACNI26_02245)	panC	463397..464233 (+)	837	WP_419798529.1	pantoate--beta-alanine ligase	-
ACNI26_RS02250 (ACNI26_02250)	-	464495..464785 (+)	291	WP_419798530.1	hypothetical protein	-
ACNI26_RS02255 (ACNI26_02255)	-	464798..465445 (+)	648	WP_419798531.1	ferredoxin	-
ACNI26_RS02260 (ACNI26_02260)	-	465457..465801 (-)	345	WP_419798532.1	hypothetical protein	-
ACNI26_RS02265 (ACNI26_02265)	dapF	465903..466724 (+)	822	WP_419798533.1	diaminopimelate epimerase	-
ACNI26_RS02270 (ACNI26_02270)	mtaB	466675..467982 (+)	1308	WP_419798534.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	-
ACNI26_RS02275 (ACNI26_02275)	pilA	467975..468904 (+)	930	WP_419798535.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNI26_RS02280 (ACNI26_02280)	-	468901..469353 (-)	453	WP_419798536.1	GNAT family N-acetyltransferase	-
ACNI26_RS02285 (ACNI26_02285)	-	469427..470308 (-)	882	WP_419798537.1	3-hydroxybutyryl-CoA dehydrogenase	-
ACNI26_RS02290 (ACNI26_02290)	-	470363..471292 (-)	930	WP_419798538.1	electron transfer flavoprotein subunit alpha/FixB family protein	-
ACNI26_RS02295 (ACNI26_02295)	-	471294..472043 (-)	750	WP_419798539.1	electron transfer flavoprotein subunit beta/FixA family protein	-
ACNI26_RS02300 (ACNI26_02300)	-	472218..472781 (-)	564	WP_419798540.1	cob(I)yrinic acid a,c-diamide adenosyltransferase	-

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 32734.54 Da
• Isoelectric Point: 5.4754

>NTDB_id=1101312 ACNI26_RS02275 WP_419798535.1 467975..468904(+) (pilA) [MAG: Terasakiella sp. isolate LRMN1-isolate]
MTEKKGWLSRLKAGLSKSSNKLTSGIGDIFTKRKLDDEALEELEDLLITSDMGISTAAKIVQGIAKSRFGKDISSEELKA
ALADEIVPILEPVTKPLDVQTGRKPHVVLVCGVNGSGKTTTIGKLAKIYSDQGLKVMLAAGDTFRAAAVEQLKVWGERTN
VPVIAKETGADAAALAYDAVAQAQADGCDVLLIDTAGRLQNKAHLMDELEKVVRVIKKVDETAPHDTVLVLDSTVGQNAH
SQVETFDKIVNVTGLIVTKLDGTAKGGVTVSLAERFGKPVHAIGVGEAAEDLRPFEARAFANALVGLDD

Nucleotide

• Length: 930 bp

>NTDB_id=1101312 ACNI26_RS02275 WP_419798535.1 467975..468904(+) (pilA) [MAG: Terasakiella sp. isolate LRMN1-isolate]
ATGACTGAAAAAAAAGGCTGGTTATCCCGTCTTAAAGCGGGCTTGAGCAAATCTTCCAATAAATTGACAAGCGGGATTGG
TGATATTTTCACCAAACGCAAGCTGGATGACGAGGCACTGGAAGAACTGGAAGACCTGCTCATTACCTCTGACATGGGGA
TTTCGACCGCCGCTAAAATCGTTCAGGGCATTGCGAAAAGCCGTTTTGGCAAAGATATCTCCAGCGAAGAATTAAAGGCT
GCTTTGGCAGATGAGATCGTCCCTATTCTCGAACCCGTCACAAAGCCGCTGGATGTGCAAACCGGGCGTAAGCCCCATGT
GGTTTTGGTCTGTGGGGTGAATGGTTCGGGCAAAACCACCACCATCGGCAAACTTGCTAAAATCTATAGCGACCAAGGGC
TGAAAGTCATGCTGGCAGCGGGCGATACCTTCCGCGCAGCTGCCGTTGAACAGCTGAAAGTCTGGGGGGAGCGCACAAAC
GTGCCCGTTATTGCCAAGGAAACGGGTGCCGATGCCGCCGCCCTTGCCTATGATGCGGTGGCACAGGCACAGGCGGATGG
CTGCGATGTCCTGTTAATCGATACCGCAGGACGCCTGCAAAACAAGGCACATTTGATGGATGAACTGGAAAAGGTTGTGC
GCGTTATCAAAAAGGTCGATGAAACCGCTCCGCATGATACGGTCTTGGTCTTGGACTCCACAGTCGGCCAAAACGCTCAT
TCTCAAGTAGAAACCTTTGATAAAATCGTCAATGTCACCGGCCTGATCGTGACCAAACTGGACGGCACCGCCAAAGGCGG
CGTGACGGTGTCTTTGGCAGAACGTTTCGGCAAACCCGTCCATGCCATCGGTGTGGGCGAGGCCGCCGAAGACCTGCGCC
CCTTCGAAGCCCGCGCGTTTGCCAATGCACTTGTGGGACTGGACGATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (105-305)

• SRP54-type protein, helical bundle domain (SRP54_N) (22-86)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.508	98.706	0.489