Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ACNANF_RS18755 Genome accession   NZ_CP182325
Coordinates   3709157..3709591 (-) Length   144 a.a.
NCBI ID   WP_000811494.1    Uniprot ID   A0A9Q6M5X1
Organism   Bacillus cereus strain BSF-CH1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3704157..3714591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNANF_RS18740 - 3705333..3705890 (+) 558 WP_000062067.1 PadR family transcriptional regulator -
  ACNANF_RS18745 metE 3706404..3708692 (+) 2289 WP_001007608.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACNANF_RS18750 comJ 3708731..3709120 (-) 390 WP_000424030.1 competence protein ComJ -
  ACNANF_RS18755 nucA/comI 3709157..3709591 (-) 435 WP_000811494.1 DNA-entry nuclease Machinery gene
  ACNANF_RS18760 - 3709818..3710567 (+) 750 WP_000388471.1 DUF3967 domain-containing protein -
  ACNANF_RS18765 kinB 3710606..3711880 (-) 1275 WP_098212666.1 sporulation sensor histidine kinase KinB -
  ACNANF_RS18770 - 3712191..3712391 (+) 201 WP_000929280.1 hypothetical protein -
  ACNANF_RS18775 - 3712514..3713677 (+) 1164 WP_000434578.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16054.43 Da        Isoelectric Point: 8.4331

>NTDB_id=1101189 ACNANF_RS18755 WP_000811494.1 3709157..3709591(-) (nucA/comI) [Bacillus cereus strain BSF-CH1]
MKQLKGIIISIIAILSILVAVYEVLVPEETSVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=1101189 ACNANF_RS18755 WP_000811494.1 3709157..3709591(-) (nucA/comI) [Bacillus cereus strain BSF-CH1]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATCGCAATTCTGTCTATTTTAGTAGCAGTTTATGAAGTACTTGTGCC
AGAGGAAACAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCGAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCATATCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGCGGAGCAGGTTCTTGGGTAGGGAATAAGTTAGATAAATACC
CAGATGGTACGCGAGTAAAATTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549

Multiple sequence alignment