Detailed information NTG1100995

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: ACNI65_RS22755
• Genome accession: NZ_CP182288
• Coordinates: 4998336..4999694 (+)
• Length: 452 a.a.
• NCBI ID: WP_416759594.1
• Uniprot ID: -
• Organism: Roseateles sp. So40a
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4993336..5004694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNI65_RS22730 (ACNI65_22730)	-	4993644..4994495 (+)	852	WP_416759585.1	PEP-CTERM sorting domain-containing protein	-
ACNI65_RS22735 (ACNI65_22735)	-	4994485..4994883 (-)	399	WP_416759586.1	type II TA system antitoxin MqsA family protein	-
ACNI65_RS22740 (ACNI65_22740)	-	4995014..4995898 (-)	885	WP_416759588.1	DMT family transporter	-
ACNI65_RS22745 (ACNI65_22745)	-	4995967..4996599 (-)	633	WP_416759590.1	LysE family transporter	-
ACNI65_RS22750 (ACNI65_22750)	-	4996760..4998226 (+)	1467	WP_416759592.1	sodium:solute symporter	-
ACNI65_RS22755 (ACNI65_22755)	radA	4998336..4999694 (+)	1359	WP_416759594.1	DNA repair protein RadA	Machinery gene
ACNI65_RS22760 (ACNI65_22760)	-	4999815..5000222 (+)	408	WP_416759596.1	hypothetical protein	-
ACNI65_RS22765 (ACNI65_22765)	-	5000275..5001198 (+)	924	WP_416759598.1	branched-chain amino acid transaminase	-
ACNI65_RS22770 (ACNI65_22770)	-	5001276..5001494 (+)	219	WP_416759600.1	zinc-finger domain-containing protein	-
ACNI65_RS22775 (ACNI65_22775)	-	5001554..5002015 (+)	462	WP_416759602.1	YybH family protein	-
ACNI65_RS22780 (ACNI65_22780)	-	5002029..5003015 (+)	987	WP_416759603.1	YheT family hydrolase	-
ACNI65_RS22785 (ACNI65_22785)	-	5003063..5003590 (+)	528	WP_416759605.1	DUF2946 family protein	-
ACNI65_RS22790 (ACNI65_22790)	-	5003668..5004267 (-)	600	WP_416759607.1	c-type cytochrome	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 47725.08 Da
• Isoelectric Point: 7.3305

>NTDB_id=1100995 ACNI65_RS22755 WP_416759594.1 4998336..4999694(+) (radA) [Roseateles sp. So40a]
MAAPKSQYVCSDCGATSAKWLGRCPSCSAWNTLVETAAEPTGGKNRFQALARSQPVTTLSEIEARDFDRTPTSLEELDRV
LGGGIVTGGVVLIGGDPGIGKSTLLLQAIEALSKQMKVLYVTGEESGAQVAMRSRRLGLDGSQVRVLAEIGLEKILATIE
VERPDFCVIDSIQTLYSEQLSSAPGSVAQVRECAAQLTRTAKSSGCAMVLVGHVTKEGALAGPRVLEHIVDTVLYFEGDT
HSSYRLVRAIKNRFGAVNEIGVFAMTEKGLKGVTNPSAIFLSTHGEPVPGSCVLVTLEGTRPMLVELQALVDGGGPNPRR
LSVGLERDRLAMLLAVLHRHAGVATMDQDVFVNAVGGVRISEPAADLAVLLAIQSSLRGKPLPKGFIAFGEVGLAGEVRP
APRGQERLKEAAKLGFSIAVVPQANAPKKPIEGLTVHAVARIEDAIDVLRGM

Nucleotide

• Length: 1359 bp

>NTDB_id=1100995 ACNI65_RS22755 WP_416759594.1 4998336..4999694(+) (radA) [Roseateles sp. So40a]
ATGGCTGCTCCGAAATCCCAATACGTCTGCTCCGACTGCGGCGCCACCAGCGCCAAGTGGCTGGGGCGCTGCCCCTCCTG
CAGCGCCTGGAACACGCTCGTGGAGACCGCCGCCGAGCCCACCGGCGGCAAGAACCGCTTCCAGGCCCTGGCCCGCAGCC
AGCCGGTGACCACGCTCTCCGAGATCGAGGCCCGCGACTTCGACCGCACTCCCACCTCGCTCGAGGAACTGGACCGCGTC
CTGGGCGGCGGCATCGTCACCGGCGGCGTCGTGCTGATCGGCGGCGATCCCGGCATCGGCAAGTCCACGCTGCTGCTGCA
GGCCATCGAGGCGCTGTCCAAGCAGATGAAGGTGCTGTACGTGACCGGCGAGGAATCCGGCGCGCAGGTCGCCATGCGCT
CCCGGCGCCTGGGCCTGGACGGCTCGCAGGTGCGGGTGCTCGCCGAGATCGGGCTGGAGAAGATCCTCGCCACCATCGAG
GTGGAACGGCCCGACTTCTGCGTGATCGACTCGATCCAGACGCTCTACTCCGAGCAGCTGTCCTCGGCGCCCGGCTCGGT
CGCGCAAGTGCGCGAATGCGCCGCGCAGCTCACCCGCACGGCCAAGTCCAGCGGCTGCGCGATGGTGCTGGTCGGCCACG
TGACCAAGGAGGGCGCCCTGGCCGGCCCGCGCGTGCTGGAGCACATCGTCGACACCGTCCTCTACTTCGAGGGCGACACC
CACAGCAGCTACCGCCTGGTGCGCGCGATCAAGAACCGCTTCGGCGCGGTCAACGAGATCGGCGTCTTCGCGATGACCGA
GAAGGGCCTCAAGGGCGTCACCAACCCGAGCGCCATCTTCCTGTCCACCCACGGCGAGCCGGTGCCCGGCTCCTGCGTGC
TGGTCACGCTGGAGGGCACCCGGCCGATGCTGGTGGAGCTGCAGGCACTGGTGGACGGCGGCGGGCCCAACCCGCGGCGG
CTGTCCGTCGGCCTGGAACGCGACCGGCTGGCGATGCTGCTCGCCGTGCTGCACCGCCATGCCGGCGTGGCGACGATGGA
CCAGGACGTCTTCGTCAACGCGGTCGGCGGCGTGCGCATCAGCGAACCCGCGGCCGACCTGGCCGTGCTGCTGGCCATCC
AGAGCTCGCTGCGCGGCAAGCCGCTGCCCAAAGGCTTCATCGCCTTCGGCGAGGTCGGCCTGGCCGGCGAGGTCCGGCCC
GCGCCCCGCGGTCAGGAACGGCTCAAGGAAGCGGCCAAGCTGGGCTTCTCGATCGCGGTCGTGCCGCAGGCCAACGCGCC
CAAGAAGCCGATCGAGGGCCTGACGGTTCACGCGGTCGCGCGCATCGAGGACGCCATCGATGTCCTGCGCGGGATGTGA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (60-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	47.588	100	0.48
radA	Streptococcus mitis NCTC 12261	46	99.558	0.458
radA	Streptococcus pneumoniae D39	47.045	97.345	0.458
radA	Streptococcus pneumoniae TIGR4	47.045	97.345	0.458
radA	Streptococcus pneumoniae R6	47.045	97.345	0.458
radA	Streptococcus pneumoniae Rx1	47.045	97.345	0.458
radA	Streptococcus mitis SK321	47.775	94.469	0.451