Detailed information NTG1100986

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNI65_RS01380
• Genome accession: NZ_CP182288
• Coordinates: 306218..307390 (+)
• Length: 390 a.a.
• NCBI ID: WP_416760760.1
• Uniprot ID: -
• Organism: Roseateles sp. So40a
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 301218..312390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNI65_RS01355 (ACNI65_01355)	-	301983..303446 (+)	1464	WP_416760756.1	efflux transporter outer membrane subunit	-
ACNI65_RS01360 (ACNI65_01360)	-	303872..305338 (+)	1467	WP_416760757.1	pectate lyase family protein	-
ACNI65_RS01365 (ACNI65_01365)	-	305455..305670 (-)	216	WP_416760758.1	hypothetical protein	-
ACNI65_RS01370 (ACNI65_01370)	-	305667..305885 (-)	219	WP_416760759.1	hypothetical protein	-
ACNI65_RS01380 (ACNI65_01380)	pilA	306218..307390 (+)	1173	WP_416760760.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNI65_RS01385 (ACNI65_01385)	ffh	307553..308950 (-)	1398	WP_416760761.1	signal recognition particle protein	-
ACNI65_RS01390 (ACNI65_01390)	-	308997..309830 (+)	834	WP_416760762.1	cytochrome C assembly family protein	-
ACNI65_RS01395 (ACNI65_01395)	-	309913..310224 (+)	312	WP_416760763.1	PP0621 family protein	-
ACNI65_RS01400 (ACNI65_01400)	-	310239..311996 (+)	1758	WP_416760764.1	sensor histidine kinase	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 41037.53 Da
• Isoelectric Point: 5.3119

>NTDB_id=1100986 ACNI65_RS01380 WP_416760760.1 306218..307390(+) (pilA) [Roseateles sp. So40a]
MFSFLKKKLGFGSSEPAPPPAPETAPAVEPVQAPAPAAPAPQIPIPATVAAPAPVYVPAPTPAPAPVVAPAPAPVAPPAP
IPVAAPEPEPAPRKSWMDKLRQGLRKTGSSISQVFTGTQIDDALYEELEAALLMADAGVKATEFLLEDLKRRVKDAKVTD
PRAVRQLLVDALAELLQPLQRQLVIGEQSPMVMMVVGVNGAGKTTSIGKLTRHLADAEANVLLAAADTFRAAAREQLAVW
ADRNRVQIVSQEGGDPSAVTFDAVVAGKARGCDVVIADTAGRLPTQLHLMEELKKIKRVIGKAQETAPHEVLLVVDGNTG
QNALMQVKSFDDALGLTGLIVTKLDGTAKGGVLAAIARERPIPVYFIGVGEKLEDLQTFDAREFAQALLE

Nucleotide

• Length: 1173 bp

>NTDB_id=1100986 ACNI65_RS01380 WP_416760760.1 306218..307390(+) (pilA) [Roseateles sp. So40a]
ATGTTCAGCTTCCTCAAGAAAAAACTCGGCTTCGGCTCCTCCGAACCCGCGCCCCCTCCGGCCCCAGAGACCGCCCCCGC
CGTCGAGCCCGTCCAGGCTCCGGCTCCAGCGGCTCCCGCGCCTCAGATCCCGATCCCGGCCACCGTCGCCGCGCCCGCGC
CGGTTTACGTTCCAGCACCCACCCCCGCGCCCGCTCCGGTCGTGGCTCCGGCTCCCGCGCCCGTCGCGCCACCCGCACCG
ATTCCCGTCGCCGCGCCGGAACCCGAACCCGCGCCGCGTAAGAGCTGGATGGACAAGCTCCGCCAGGGCCTGCGCAAGAC
CGGCTCCAGCATCTCGCAGGTCTTCACCGGCACGCAGATCGACGACGCCCTTTATGAAGAGCTCGAGGCCGCGCTGCTGA
TGGCCGACGCCGGCGTGAAGGCCACCGAGTTCCTGCTCGAGGACCTCAAGCGCCGCGTCAAGGACGCCAAGGTCACCGAC
CCGCGCGCCGTCCGACAACTGCTCGTGGACGCGCTCGCCGAGCTGCTCCAGCCGCTGCAGCGCCAGCTCGTGATCGGCGA
GCAGTCGCCGATGGTCATGATGGTCGTGGGCGTGAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTCACCCGCCATC
TCGCCGACGCGGAAGCCAACGTGCTGCTCGCCGCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGCCGTCTGG
GCCGATCGCAACCGTGTGCAGATCGTCAGCCAGGAAGGCGGCGACCCGTCCGCCGTCACCTTCGATGCCGTCGTCGCCGG
CAAGGCGCGCGGCTGCGATGTCGTCATCGCCGACACCGCCGGGCGCCTGCCCACGCAGCTCCACCTGATGGAGGAGCTCA
AGAAGATCAAGCGCGTGATCGGCAAGGCGCAGGAGACCGCGCCGCATGAGGTGCTGCTCGTCGTCGACGGCAACACCGGC
CAGAACGCGCTGATGCAGGTGAAGTCCTTCGATGACGCGCTCGGCCTCACCGGCCTGATCGTCACGAAGCTCGACGGCAC
CGCCAAGGGCGGCGTGCTCGCGGCCATCGCGCGCGAGCGCCCCATCCCCGTCTACTTCATCGGCGTGGGCGAGAAGCTCG
AGGACCTGCAGACCTTCGACGCGCGCGAGTTCGCGCAGGCGCTGCTCGAGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-172)

• SRP54-type protein, GTPase domain (SRP54) (191-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.351	94.872	0.487