Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACGLX3_RS07635 Genome accession   NZ_CP182241
Coordinates   1637153..1637779 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain Eh-YZU05     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1632153..1642779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGLX3_RS07615 (ACGLX3_007615) - 1632552..1634312 (-) 1761 WP_047726837.1 AAA family ATPase -
  ACGLX3_RS07620 (ACGLX3_007620) matP 1634499..1634951 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  ACGLX3_RS07625 (ACGLX3_007625) ompA 1635017..1636069 (-) 1053 WP_017694761.1 porin OmpA -
  ACGLX3_RS07630 (ACGLX3_007630) sulA 1636426..1636935 (-) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  ACGLX3_RS07635 (ACGLX3_007635) sxy/tfoX 1637153..1637779 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  ACGLX3_RS07640 (ACGLX3_007640) yccS 1637736..1639898 (-) 2163 WP_015570895.1 YccS family putative transporter -
  ACGLX3_RS07645 (ACGLX3_007645) - 1639917..1640363 (-) 447 WP_003858149.1 YccF domain-containing protein -
  ACGLX3_RS07650 (ACGLX3_007650) helD 1640486..1642540 (+) 2055 WP_032653161.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=1100964 ACGLX3_RS07635 WP_017384804.1 1637153..1637779(+) (sxy/tfoX) [Enterobacter hormaechei strain Eh-YZU05]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1100964 ACGLX3_RS07635 WP_017384804.1 1637153..1637779(+) (sxy/tfoX) [Enterobacter hormaechei strain Eh-YZU05]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGTGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment