Detailed information NTG1100724

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACM9DY_RS17775
• Genome accession: NZ_CP182170
• Coordinates: 3539785..3540948 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain F3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3534785..3545948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM9DY_RS17745 (ACM9DY_17745)	-	3535050..3535469 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
ACM9DY_RS17750 (ACM9DY_17750)	comFC	3535543..3536232 (-)	690	WP_205649078.1	phosphoribosyltransferase family protein	Machinery gene
ACM9DY_RS17755 (ACM9DY_17755)	-	3536238..3536522 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
ACM9DY_RS17760 (ACM9DY_17760)	comFA	3536580..3537965 (-)	1386	WP_230639653.1	DEAD/DEAH box helicase	Machinery gene
ACM9DY_RS17765 (ACM9DY_17765)	-	3538073..3538921 (-)	849	WP_230639654.1	DegV family protein	-
ACM9DY_RS17770 (ACM9DY_17770)	degU	3539019..3539708 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACM9DY_RS17775 (ACM9DY_17775)	degS	3539785..3540948 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ACM9DY_RS17780 (ACM9DY_17780)	-	3541171..3541818 (+)	648	WP_043867472.1	YigZ family protein	-
ACM9DY_RS17785 (ACM9DY_17785)	-	3541823..3543037 (+)	1215	WP_416515796.1	LCP family protein	-
ACM9DY_RS17790 (ACM9DY_17790)	-	3543127..3544203 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACM9DY_RS17795 (ACM9DY_17795)	tuaH	3544336..3545532 (-)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1100724 ACM9DY_RS17775 WP_003151385.1 3539785..3540948(-) (degS) [Bacillus velezensis strain F3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1100724 ACM9DY_RS17775 WP_003151385.1 3539785..3540948(-) (degS) [Bacillus velezensis strain F3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948