Detailed information NTG0110038

Bioinformatically predicted

Overview

• Name: pilA/pilA1
• Type: Machinery gene
• Locus tag: ABXS88_RS14740
• Genome accession: NZ_AP031572
• Coordinates: 3263670..3264104 (-)
• Length: 144 a.a.
• NCBI ID: WP_353672804.1
• Uniprot ID: -
• Organism: Synechocystis sp. LKSZ1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3258670..3269104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXS88_RS14725 (OLK001_28990)	-	3260657..3261466 (-)	810	WP_353672802.1	hypothetical protein	-
ABXS88_RS14730 (OLK001_29000)	-	3261623..3262642 (+)	1020	WP_353674830.1	IS4 family transposase	-
ABXS88_RS14735 (OLK001_29010)	-	3262972..3263484 (-)	513	WP_353672803.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ABXS88_RS14740 (OLK001_29020)	pilA/pilA1	3263670..3264104 (-)	435	WP_353672804.1	type IV pilin-like G/H family protein	Machinery gene
ABXS88_RS14745 (OLK001_29030)	-	3264216..3265535 (-)	1320	WP_353672805.1	class I SAM-dependent methyltransferase	-
ABXS88_RS14750 (OLK001_29040)	argS	3265652..3267400 (-)	1749	WP_353672806.1	arginine--tRNA ligase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15114.08 Da
• Isoelectric Point: 9.9645

>NTDB_id=110038 ABXS88_RS14740 WP_353672804.1 3263670..3264104(-) (pilA/pilA1) [Synechocystis sp. LKSZ1]
MDSNFKFKLLSHLTAKKEDKGFTLIELLVVVVIIGVLAAIALPNLISQAGKARQAEGRNGVGALNRAQQAYRTENPTFGN
LSALDTKLVNPGKFFTFVGDNAGSATTATSTAQPKSAAGDATTTAIGTVSYDSTNQTFTVTTSW

Nucleotide

• Length: 435 bp

>NTDB_id=110038 ABXS88_RS14740 WP_353672804.1 3263670..3264104(-) (pilA/pilA1) [Synechocystis sp. LKSZ1]
ATGGATAGTAATTTTAAGTTCAAGCTTCTCTCTCACCTCACCGCTAAAAAAGAAGATAAAGGTTTTACTTTAATTGAACT
ACTCGTCGTTGTTGTGATCATCGGGGTTCTCGCCGCCATCGCCCTCCCTAACCTCATCTCCCAAGCCGGTAAAGCCCGGC
AGGCTGAAGGCAGAAATGGTGTGGGTGCCCTTAACCGTGCCCAACAAGCCTATCGGACGGAAAACCCTACATTTGGTAAC
TTAAGTGCCTTAGATACAAAGTTGGTCAATCCTGGCAAGTTCTTTACTTTCGTTGGCGACAACGCAGGCTCCGCTACTAC
TGCAACTTCTACTGCTCAGCCTAAGAGCGCAGCTGGAGATGCAACCACCACGGCTATTGGAACAGTTAGTTATGACTCAA
CAAACCAGACCTTTACCGTTACGACAAGCTGGTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (19-42)

• Type IV pilin-like G and H, putative (Pilin_GH) (54-138)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA/pilA1	Synechocystis sp. PCC 6803	51.049	99.306	0.507