Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   NVR98_RS07675 Genome accession   NZ_CP181519
Coordinates   1628198..1628824 (+) Length   208 a.a.
NCBI ID   WP_022647658.1    Uniprot ID   A0A431SK42
Organism   Enterobacter hormaechei strain NR2329     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1623198..1633824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NVR98_RS07655 (NVR98_007655) - 1623597..1625357 (-) 1761 WP_022647656.1 AAA family ATPase -
  NVR98_RS07660 (NVR98_007660) matP 1625544..1625996 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  NVR98_RS07665 (NVR98_007665) ompA 1626062..1627114 (-) 1053 WP_017694761.1 porin OmpA -
  NVR98_RS07670 (NVR98_007670) sulA 1627471..1627980 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  NVR98_RS07675 (NVR98_007675) sxy/tfoX 1628198..1628824 (+) 627 WP_022647658.1 TfoX/Sxy family DNA transformation protein Regulator
  NVR98_RS07680 (NVR98_007680) yccS 1628781..1630943 (-) 2163 WP_022647659.1 YccS family putative transporter -
  NVR98_RS07685 (NVR98_007685) - 1630962..1631408 (-) 447 WP_022647660.1 YccF domain-containing protein -
  NVR98_RS07690 (NVR98_007690) helD 1631531..1633585 (+) 2055 WP_022647661.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23940.50 Da        Isoelectric Point: 9.4592

>NTDB_id=1100339 NVR98_RS07675 WP_022647658.1 1628198..1628824(+) (sxy/tfoX) [Enterobacter hormaechei strain NR2329]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSVLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1100339 NVR98_RS07675 WP_022647658.1 1628198..1628824(+) (sxy/tfoX) [Enterobacter hormaechei strain NR2329]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTGTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A431SK42

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment