Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   NVR99_RS07675 Genome accession   NZ_CP181512
Coordinates   1627420..1628046 (+) Length   208 a.a.
NCBI ID   WP_022647658.1    Uniprot ID   A0A431SK42
Organism   Enterobacter hormaechei strain NR2333     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1622420..1633046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NVR99_RS07655 (NVR99_007655) - 1622819..1624579 (-) 1761 WP_022647656.1 AAA family ATPase -
  NVR99_RS07660 (NVR99_007660) matP 1624766..1625218 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  NVR99_RS07665 (NVR99_007665) ompA 1625284..1626336 (-) 1053 WP_017694761.1 porin OmpA -
  NVR99_RS07670 (NVR99_007670) sulA 1626693..1627202 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  NVR99_RS07675 (NVR99_007675) sxy/tfoX 1627420..1628046 (+) 627 WP_022647658.1 TfoX/Sxy family DNA transformation protein Regulator
  NVR99_RS07680 (NVR99_007680) yccS 1628003..1630165 (-) 2163 WP_022647659.1 YccS family putative transporter -
  NVR99_RS07685 (NVR99_007685) - 1630184..1630630 (-) 447 WP_022647660.1 YccF domain-containing protein -
  NVR99_RS07690 (NVR99_007690) helD 1630753..1632807 (+) 2055 WP_022647661.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23940.50 Da        Isoelectric Point: 9.4592

>NTDB_id=1100318 NVR99_RS07675 WP_022647658.1 1627420..1628046(+) (sxy/tfoX) [Enterobacter hormaechei strain NR2333]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSVLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1100318 NVR99_RS07675 WP_022647658.1 1627420..1628046(+) (sxy/tfoX) [Enterobacter hormaechei strain NR2333]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTGTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A431SK42

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment