Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   ACMS1Y_RS05610 Genome accession   NZ_CP181431
Coordinates   1148101..1149063 (+) Length   320 a.a.
NCBI ID   WP_410552623.1    Uniprot ID   -
Organism   Bacillus safensis strain BS22LVI     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1143101..1154063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMS1Y_RS05580 argF 1143440..1144390 (+) 951 WP_024425059.1 ornithine carbamoyltransferase -
  ACMS1Y_RS05585 - 1144493..1144672 (+) 180 WP_008348517.1 YjzC family protein -
  ACMS1Y_RS05590 - 1144836..1146101 (+) 1266 WP_024425058.1 MFS transporter -
  ACMS1Y_RS05595 - 1146213..1146407 (-) 195 WP_003211779.1 YjzD family protein -
  ACMS1Y_RS05600 - 1146620..1147360 (+) 741 WP_024425057.1 hypothetical protein -
  ACMS1Y_RS05605 - 1147434..1148009 (+) 576 WP_415316219.1 nad binding enzyme -
  ACMS1Y_RS05610 med 1148101..1149063 (+) 963 WP_410552623.1 BMP family ABC transporter substrate-binding protein Regulator
  ACMS1Y_RS05615 comZ 1149076..1149273 (+) 198 WP_024425054.1 ComZ family protein Regulator
  ACMS1Y_RS05620 - 1149283..1149516 (-) 234 WP_024426489.1 hypothetical protein -
  ACMS1Y_RS05625 - 1149688..1150626 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  ACMS1Y_RS05630 fabF 1150648..1151889 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  ACMS1Y_RS05635 - 1151967..1152770 (+) 804 WP_024425050.1 DUF2268 domain-containing protein -
  ACMS1Y_RS05640 - 1152920..1153900 (+) 981 WP_024426488.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 35625.45 Da        Isoelectric Point: 5.0003

>NTDB_id=1100083 ACMS1Y_RS05610 WP_410552623.1 1148101..1149063(+) (med) [Bacillus safensis strain BS22LVI]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKVNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=1100083 ACMS1Y_RS05610 WP_410552623.1 1148101..1149063(+) (med) [Bacillus safensis strain BS22LVI]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGGTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCATACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.217

97.813

0.628

Multiple sequence alignment