Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACMS1Y_RS05245 Genome accession   NZ_CP181431
Coordinates   1071088..1072038 (+) Length   316 a.a.
NCBI ID   WP_056766093.1    Uniprot ID   -
Organism   Bacillus safensis strain BS22LVI     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1066088..1077038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMS1Y_RS05215 - 1067552..1068412 (+) 861 WP_024425480.1 SDR family oxidoreductase -
  ACMS1Y_RS05220 - 1068469..1068705 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  ACMS1Y_RS05225 comK 1068995..1069573 (+) 579 WP_024425481.1 competence protein ComK Regulator
  ACMS1Y_RS05230 - 1069873..1070355 (+) 483 WP_024425482.1 hypothetical protein -
  ACMS1Y_RS05235 - 1070387..1070539 (-) 153 Protein_973 PLP-dependent aminotransferase family protein -
  ACMS1Y_RS05240 - 1070648..1070926 (+) 279 WP_171464240.1 barstar family protein -
  ACMS1Y_RS05245 ceuB 1071088..1072038 (+) 951 WP_056766093.1 ABC transporter permease Machinery gene
  ACMS1Y_RS05250 - 1072031..1072981 (+) 951 WP_171464128.1 iron chelate uptake ABC transporter family permease subunit -
  ACMS1Y_RS05255 - 1072972..1073730 (+) 759 WP_024425488.1 ABC transporter ATP-binding protein -
  ACMS1Y_RS05260 - 1073752..1074696 (+) 945 WP_034621816.1 siderophore ABC transporter substrate-binding protein -
  ACMS1Y_RS05265 - 1074835..1075788 (+) 954 WP_197172758.1 LCP family protein -
  ACMS1Y_RS05270 - 1075860..1076222 (-) 363 WP_024425491.1 hypothetical protein -
  ACMS1Y_RS05275 - 1076380..1076997 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34930.33 Da        Isoelectric Point: 9.7476

>NTDB_id=1100081 ACMS1Y_RS05245 WP_056766093.1 1071088..1072038(+) (ceuB) [Bacillus safensis strain BS22LVI]
MKLYQLSLLFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTHVNPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKGLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1100081 ACMS1Y_RS05245 WP_056766093.1 1071088..1072038(+) (ceuB) [Bacillus safensis strain BS22LVI]
ATGAAATTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACATGTGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGTGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAGGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTATATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.163

95.253

0.487

Multiple sequence alignment