Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACMS1Y_RS04245 Genome accession   NZ_CP181431
Coordinates   888797..889588 (+) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus safensis strain BS22LVI     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 883797..894588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMS1Y_RS04210 - 883886..884434 (+) 549 WP_103132713.1 thioredoxin family protein -
  ACMS1Y_RS04215 - 884768..885235 (+) 468 WP_024425226.1 thiol-disulfide oxidoreductase DCC family protein -
  ACMS1Y_RS04220 - 885272..886528 (-) 1257 WP_415316210.1 helix-turn-helix domain-containing protein -
  ACMS1Y_RS04225 - 886800..887387 (+) 588 WP_024425224.1 nitroreductase -
  ACMS1Y_RS04230 - 887425..887580 (-) 156 WP_024425223.1 YfhD family protein -
  ACMS1Y_RS04235 - 887642..887752 (-) 111 WP_017358836.1 YfhE family protein -
  ACMS1Y_RS04240 - 887805..888702 (-) 898 Protein_794 TIGR01777 family oxidoreductase -
  ACMS1Y_RS04245 recX 888797..889588 (+) 792 WP_024425808.1 recombination regulator RecX Regulator
  ACMS1Y_RS04250 - 889592..889906 (+) 315 WP_041087336.1 YfhH family protein -
  ACMS1Y_RS04255 - 889930..890103 (-) 174 WP_008360604.1 YpzG family protein -
  ACMS1Y_RS04260 - 890129..890277 (-) 149 Protein_798 small, acid-soluble spore protein K -
  ACMS1Y_RS04265 - 890394..890666 (+) 273 WP_024425219.1 YfhJ family protein -
  ACMS1Y_RS04270 - 890966..891949 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=1100077 ACMS1Y_RS04245 WP_024425808.1 888797..889588(+) (recX) [Bacillus safensis strain BS22LVI]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1100077 ACMS1Y_RS04245 WP_024425808.1 888797..889588(+) (recX) [Bacillus safensis strain BS22LVI]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTCGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCCTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGATGATGACACGATTGAACAGGCGCTATCCCAATACCCTGATGACCTACAGCTCGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAACGAAAAGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGGTATGACGGATCATTTGAAAAGAAGATGAAA
GTAAAGCAATTTTTATTCAGAAAAGGCTTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639

Multiple sequence alignment