Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ACLZHR_RS11500 Genome accession   NZ_CP181399
Coordinates   2138126..2139076 (+) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia aryabhattai strain C_CMRP_4_3_1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2133126..2144076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZHR_RS11470 (ACLZHR_11470) - 2134116..2135147 (+) 1032 WP_243494861.1 zinc-binding dehydrogenase -
  ACLZHR_RS11475 (ACLZHR_11475) - 2135191..2135520 (+) 330 WP_057244395.1 hypothetical protein -
  ACLZHR_RS11480 (ACLZHR_11480) - 2135853..2136017 (+) 165 WP_013057894.1 hypothetical protein -
  ACLZHR_RS11485 (ACLZHR_11485) - 2136099..2136353 (-) 255 WP_013057893.1 hypothetical protein -
  ACLZHR_RS11490 (ACLZHR_11490) - 2136716..2137522 (+) 807 WP_028414468.1 cell wall hydrolase -
  ACLZHR_RS11495 (ACLZHR_11495) - 2137761..2137895 (+) 135 WP_255219778.1 hypothetical protein -
  ACLZHR_RS11500 (ACLZHR_11500) ceuB 2138126..2139076 (+) 951 WP_028414467.1 ABC transporter permease Machinery gene
  ACLZHR_RS11505 (ACLZHR_11505) - 2139069..2140016 (+) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  ACLZHR_RS11510 (ACLZHR_11510) - 2140010..2140768 (+) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  ACLZHR_RS11515 (ACLZHR_11515) - 2140792..2141748 (+) 957 WP_033580631.1 siderophore ABC transporter substrate-binding protein -
  ACLZHR_RS11520 (ACLZHR_11520) - 2142068..2142922 (+) 855 WP_047750489.1 manganese catalase family protein -
  ACLZHR_RS11525 (ACLZHR_11525) - 2143176..2143316 (+) 141 WP_176343797.1 hypothetical protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=1100004 ACLZHR_RS11500 WP_028414467.1 2138126..2139076(+) (ceuB) [Priestia aryabhattai strain C_CMRP_4_3_1]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1100004 ACLZHR_RS11500 WP_028414467.1 2138126..2139076(+) (ceuB) [Priestia aryabhattai strain C_CMRP_4_3_1]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTCTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497


Multiple sequence alignment