Detailed information NTG1099939

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNFWN_RS07050
• Genome accession: NZ_CP181387
• Coordinates: 1475436..1476563 (+)
• Length: 375 a.a.
• NCBI ID: WP_132648645.1
• Uniprot ID: A0A4R2MMT5
• Organism: Rubrivivax gelatinosus isolate AJ1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1470436..1481563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNFWN_RS07020	prfA	1470699..1471793 (-)	1095	WP_132648650.1	peptide chain release factor 1	-
ACNFWN_RS07025	hemA	1471858..1473153 (-)	1296	WP_132648649.1	glutamyl-tRNA reductase	-
ACNFWN_RS07030	-	1473243..1473524 (+)	282	WP_132648648.1	hypothetical protein	-
ACNFWN_RS07035	miaB	1473534..1474868 (-)	1335	WP_132648647.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	-
ACNFWN_RS07040	-	1474870..1475250 (-)	381	WP_132648646.1	hypothetical protein	-
ACNFWN_RS07050	pilA	1475436..1476563 (+)	1128	WP_132648645.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNFWN_RS07055	ffh	1476845..1478212 (-)	1368	WP_132648644.1	signal recognition particle protein	-
ACNFWN_RS07060	-	1478258..1479076 (+)	819	WP_132648643.1	cytochrome C assembly family protein	-
ACNFWN_RS07065	-	1479073..1479306 (+)	234	WP_132648642.1	PP0621 family protein	-
ACNFWN_RS07070	-	1479317..1481185 (+)	1869	WP_132648641.1	sensor histidine kinase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 39432.31 Da
• Isoelectric Point: 5.0501

>NTDB_id=1099939 ACNFWN_RS07050 WP_132648645.1 1475436..1476563(+) (pilA) [Rubrivivax gelatinosus isolate AJ1]
MFSFFKKKVTPAPAAPVEPTPAEASDQAPVLSDDELERAALAAAPEPEALPEPAPLPLDAAPVAEVPAAAEPRSRWLDRL
KLGLRKTGSSLTQVFTGTKIDDALYEDLESALLVADAGVGATEYLLQDLKRRVKEAKATEPAVVKALLADAVAELLAPLQ
KPLAIGQAMPTVVMVAGVNGAGKTTTIGKLTRHLAESDRRVLLAAADTFRAAAREQLAVWADRNRVEIVSQQGGDPAAVS
FDAVTAGRARGCDVVIADTAGRLPTQLHLMDELKKIKRTIAKAQDGAPHEVLLVIDGNTGQNALAQVKAFDAALGLTGLI
VTKLDGTAKGGVLAAIARWCAEQGRVVPVYFIGVGERLEDLQTFDAREFANALLG

Nucleotide

• Length: 1128 bp

>NTDB_id=1099939 ACNFWN_RS07050 WP_132648645.1 1475436..1476563(+) (pilA) [Rubrivivax gelatinosus isolate AJ1]
ATGTTCAGCTTTTTCAAGAAGAAGGTCACACCGGCCCCGGCCGCCCCCGTGGAGCCCACGCCGGCCGAGGCCTCCGACCA
GGCCCCGGTGCTGTCGGACGACGAGCTGGAGCGTGCCGCGCTCGCCGCTGCGCCGGAGCCCGAGGCCCTGCCCGAACCGG
CACCGTTGCCGCTCGACGCCGCTCCAGTGGCCGAGGTGCCGGCCGCTGCCGAGCCGCGTTCGCGCTGGCTCGACCGGCTC
AAGCTCGGCCTGCGCAAGACCGGCAGCAGCCTGACGCAGGTCTTCACCGGCACGAAGATCGACGACGCGCTGTACGAAGA
CCTGGAGTCGGCGCTGCTGGTGGCCGATGCCGGTGTCGGCGCGACGGAGTACCTGCTGCAGGACCTGAAACGTCGCGTGA
AGGAGGCCAAGGCCACCGAGCCCGCGGTGGTCAAGGCGCTGCTCGCCGACGCCGTGGCCGAGCTGCTGGCGCCGCTGCAG
AAGCCGCTCGCGATCGGCCAGGCGATGCCGACGGTGGTGATGGTCGCCGGCGTCAATGGCGCCGGCAAGACGACGACGAT
CGGCAAGCTGACGCGCCATCTGGCCGAGTCCGACCGGCGCGTGCTGCTGGCCGCGGCCGACACTTTCCGCGCCGCGGCGC
GCGAACAGCTCGCGGTCTGGGCCGACCGCAACCGCGTCGAGATCGTCAGCCAGCAGGGCGGGGATCCGGCGGCGGTGAGC
TTCGACGCCGTCACCGCCGGCCGCGCGCGCGGCTGCGACGTCGTCATCGCCGACACCGCCGGGCGCCTGCCGACGCAGCT
GCACCTGATGGACGAGCTGAAGAAGATCAAGCGCACGATCGCCAAGGCGCAGGACGGCGCGCCGCACGAGGTGCTGCTGG
TCATCGACGGCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAGGCCTTCGACGCCGCGCTGGGCCTCACCGGCCTGATC
GTCACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGCTGGCCGCGATCGCGCGCTGGTGCGCCGAGCAGGGCCGCGTCGT
GCCGGTCTACTTCATCGGCGTCGGCGAGCGGCTGGAAGACCTGCAGACCTTCGACGCCCGCGAGTTCGCGAACGCGCTGC
TGGGGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (88-150)

• SRP54-type protein, GTPase domain (SRP54) (170-375)

3D structure

• AlphaFold DB: A0A4R2MMT5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.031	100	0.528