Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACLWOT_RS08660 Genome accession   NZ_CP181368
Coordinates   1838649..1840460 (+) Length   603 a.a.
NCBI ID   WP_416452579.1    Uniprot ID   -
Organism   Faecalibacterium prausnitzii strain 28     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1833649..1845460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLWOT_RS08640 (ACLWOT_08640) - 1833933..1834589 (-) 657 WP_097785909.1 sortase -
  ACLWOT_RS08645 (ACLWOT_08645) - 1834653..1835633 (-) 981 WP_416452577.1 Na/Pi cotransporter family protein -
  ACLWOT_RS08650 (ACLWOT_08650) - 1835857..1836366 (+) 510 WP_236131233.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLWOT_RS08655 (ACLWOT_08655) - 1836350..1838647 (+) 2298 WP_416452578.1 ABC transporter ATP-binding protein -
  ACLWOT_RS08660 (ACLWOT_08660) rcrQ 1838649..1840460 (+) 1812 WP_416452579.1 ABC transporter ATP-binding protein Regulator
  ACLWOT_RS08665 (ACLWOT_08665) - 1840662..1841579 (-) 918 WP_113991983.1 LysR family transcriptional regulator -
  ACLWOT_RS08670 (ACLWOT_08670) - 1841751..1843778 (+) 2028 WP_318177438.1 FAD-binding protein -
  ACLWOT_RS08675 (ACLWOT_08675) - 1843971..1844891 (+) 921 WP_217285212.1 AAA family ATPase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 66692.99 Da        Isoelectric Point: 6.5141

>NTDB_id=1099861 ACLWOT_RS08660 WP_416452579.1 1838649..1840460(+) (rcrQ) [Faecalibacterium prausnitzii strain 28]
MPRPGRPTTERAKDFKGTLRQLIRTMSHYKLPLAAAMLFAILSTIFNIAGPKVLAKATTALATGWIARLRGTGSIDFVYI
GRILLFLLGMYLLSSAFSFIQGWLMTGLSQKVCYDFRRQISEKLNRLPLAYFEKRTVGEVLSRITNDVDTLGQSLNQSIT
QLITSVTTMIGVLVMMLSISPRMTLIALLILPVSLALVLVVVKFSQKYFKAQQATLGVVNGQVEEIYAGHNVVKAFNREA
VVLADFNAANDKLYESAWKSQFLSGLMMPIMNFVGNLGYVAVAIVGSIFAANGVITIGDIQAFIQYVKNFTQPIQQLSQV
SNMLQSMAAAAERVFEFLNEPEEAQLADPARRADPADIDGQVTFDHVRFGYTPDKTVIHDFSCTVQPGQKVAIVGPTGAG
KTTMVKLLMRFYDVDAGSITLNGHNVRDFDRSALREGFGMVLQDTWLFKGTIMENIRYGRLDATDEEVIAAAKAANADHF
IRTLPGGYQMELNEDASNVSQGQKQLLTIARTILADNRILILDEATSSVDTRTEQRIQTAMDRLMEGRTSFVIAHRLSTI
RDADLILVMRDGDIVEQGTHDQLIEAGGFYADLYNSQFEDVVD

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=1099861 ACLWOT_RS08660 WP_416452579.1 1838649..1840460(+) (rcrQ) [Faecalibacterium prausnitzii strain 28]
ATGCCCAGACCCGGACGTCCCACCACCGAGCGCGCCAAGGACTTTAAAGGCACGCTGCGGCAGCTCATCCGCACCATGAG
CCACTACAAGCTGCCCCTTGCGGCAGCCATGCTGTTTGCAATTCTTTCTACCATCTTCAACATTGCAGGCCCCAAGGTGC
TGGCAAAGGCCACCACCGCCCTTGCCACCGGCTGGATCGCCCGGCTGCGCGGCACCGGCAGCATCGATTTTGTGTATATC
GGCCGCATTCTGCTGTTTTTGTTGGGGATGTACCTGCTGAGCAGCGCCTTCAGCTTTATTCAGGGCTGGCTGATGACCGG
CCTTTCTCAGAAGGTCTGCTACGACTTCCGTCGCCAGATCAGTGAAAAGCTCAACCGCCTGCCGCTGGCGTACTTTGAAA
AGCGCACCGTGGGCGAGGTGCTCTCCCGCATCACCAACGATGTGGACACACTGGGCCAGAGCCTGAACCAGAGCATCACC
CAGCTGATCACCAGCGTGACCACCATGATCGGTGTGCTGGTGATGATGCTCTCCATCAGTCCCCGCATGACCCTGATTGC
CCTGCTGATCTTACCGGTATCGCTGGCGCTGGTGCTGGTGGTGGTCAAGTTCAGCCAGAAGTACTTCAAGGCACAGCAGG
CCACCCTGGGCGTGGTCAACGGTCAGGTCGAGGAGATCTACGCCGGCCACAATGTGGTCAAGGCGTTTAACCGCGAGGCC
GTGGTACTGGCAGACTTCAACGCCGCCAACGATAAGCTGTACGAATCCGCATGGAAAAGCCAGTTCCTCTCGGGCCTTAT
GATGCCCATCATGAACTTTGTGGGCAACCTGGGCTATGTGGCAGTGGCCATCGTGGGCAGCATTTTTGCTGCAAACGGCG
TTATCACCATTGGTGATATTCAGGCTTTTATCCAGTATGTCAAAAACTTTACCCAGCCCATCCAGCAGCTTTCGCAGGTG
TCCAATATGCTGCAAAGCATGGCCGCTGCCGCCGAGCGGGTGTTCGAGTTTTTGAACGAGCCGGAGGAAGCGCAGCTGGC
AGACCCCGCCCGCCGCGCCGACCCTGCCGACATTGACGGACAGGTCACCTTTGACCATGTGCGCTTCGGCTACACCCCGG
ACAAGACCGTCATCCACGACTTCAGCTGCACGGTGCAGCCCGGCCAGAAGGTAGCCATCGTAGGCCCCACCGGTGCGGGC
AAGACCACCATGGTCAAGCTGCTGATGCGCTTTTACGATGTGGATGCCGGTTCTATCACCCTGAACGGCCACAATGTGCG
GGACTTTGACCGCAGCGCCTTGCGCGAGGGCTTTGGCATGGTGCTGCAGGACACATGGCTGTTTAAGGGCACCATCATGG
AGAACATCCGCTACGGCCGGCTGGACGCCACCGATGAAGAGGTGATCGCCGCTGCAAAGGCAGCCAACGCCGACCACTTT
ATCCGCACCCTGCCCGGCGGCTACCAGATGGAACTGAACGAGGACGCCTCCAACGTCAGTCAGGGACAAAAGCAGCTGCT
CACCATCGCCCGCACCATTCTGGCAGATAACCGCATCCTGATTTTGGACGAGGCTACCAGCAGCGTGGATACCCGCACCG
AGCAGCGCATCCAGACCGCCATGGACCGCCTGATGGAGGGGCGCACCAGCTTTGTCATCGCCCACCGCCTTTCCACCATC
CGGGATGCCGACCTCATCCTTGTGATGCGGGACGGCGACATTGTGGAGCAGGGCACCCACGACCAGCTGATCGAGGCAGG
CGGCTTCTACGCTGACCTGTACAACAGCCAGTTTGAGGACGTGGTGGATTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(34-313)

ABC transporter (ABC_tran)

(379-527)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.68

97.512

0.494

Multiple sequence alignment