Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H9T68_RS20700 Genome accession   NZ_CP181346
Coordinates   4571981..4572379 (-) Length   132 a.a.
NCBI ID   WP_280187784.1    Uniprot ID   -
Organism   Delftia sp. PS-11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4566981..4577379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H9T68_RS20685 (H9T68_020680) - 4568826..4571054 (-) 2229 WP_280187789.1 methyl-accepting chemotaxis protein -
  H9T68_RS20690 (H9T68_020685) - 4571073..4571600 (-) 528 WP_280187787.1 chemotaxis protein CheW -
  H9T68_RS20695 (H9T68_020690) - 4571616..4571981 (-) 366 WP_280187786.1 response regulator -
  H9T68_RS20700 (H9T68_020695) pilG 4571981..4572379 (-) 399 WP_280187784.1 response regulator Regulator
  H9T68_RS20705 (H9T68_020700) - 4572434..4572586 (-) 153 WP_280187900.1 rubredoxin -
  H9T68_RS20710 (H9T68_020705) thiD 4572702..4573661 (+) 960 WP_280187782.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  H9T68_RS20715 (H9T68_020710) hemL 4573645..4574949 (+) 1305 WP_280187781.1 glutamate-1-semialdehyde 2,1-aminomutase -
  H9T68_RS20720 (H9T68_020715) - 4575008..4575625 (-) 618 WP_280187779.1 DNA-3-methyladenine glycosylase I -
  H9T68_RS20725 (H9T68_020720) - 4575658..4576884 (-) 1227 WP_280187777.1 MFS transporter -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14686.00 Da        Isoelectric Point: 7.7122

>NTDB_id=1099814 H9T68_RS20700 WP_280187784.1 4571981..4572379(-) (pilG) [Delftia sp. PS-11]
MTTTGKPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
ETPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1099814 H9T68_RS20700 WP_280187784.1 4571981..4572379(-) (pilG) [Delftia sp. PS-11]
GTGACGACAACGGGTAAACCCTTGCGGGTGCTGGTGGTGGACGACAGCAACACCATCCGGCGCAGCGCGGAAATCTTTCT
CAAGCAGGGCGGACACGAGGTGTTGCTGGCAGACGACGGCTTCGATGCGCTGTCCAAGGTCAACGACTACCAGCCCCAGC
TGATCTTCTGCGACATCCTGATGCCCAAGCTCGACGGGTACCAGACCTGCGCCATCATCAAGCGCAACGCACGGTTCGCC
GAGACCCCTGTTGTCATGCTTTCCTCCAAGGATGGTGTCTTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
TCTCACCAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTTGGCAAGCAAACCATAGGAGCGCTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508

Multiple sequence alignment