Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACM530_RS11855 Genome accession   NZ_CP181333
Coordinates   2574150..2574557 (+) Length   135 a.a.
NCBI ID   WP_106575669.1    Uniprot ID   A0A7M1KEX5
Organism   Pseudomonas sp. NFX183     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2569150..2579557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM530_RS11830 (ACM530_11830) pyrR 2570129..2570635 (-) 507 WP_106575674.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACM530_RS11835 (ACM530_11835) ruvX 2570708..2571145 (-) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  ACM530_RS11840 (ACM530_11840) - 2571145..2571714 (-) 570 WP_106575672.1 YqgE/AlgH family protein -
  ACM530_RS11845 (ACM530_11845) - 2571974..2572879 (-) 906 WP_106575671.1 energy transducer TonB -
  ACM530_RS11850 (ACM530_11850) gshB 2572957..2573910 (-) 954 WP_304629371.1 glutathione synthase -
  ACM530_RS11855 (ACM530_11855) pilG 2574150..2574557 (+) 408 WP_106575669.1 twitching motility response regulator PilG Regulator
  ACM530_RS11860 (ACM530_11860) pilH 2574604..2574969 (+) 366 WP_014720320.1 twitching motility response regulator PilH -
  ACM530_RS11865 (ACM530_11865) - 2574982..2575506 (+) 525 WP_119737459.1 chemotaxis protein CheW -
  ACM530_RS11870 (ACM530_11870) - 2575503..2577554 (+) 2052 WP_416364826.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14950.46 Da        Isoelectric Point: 7.3843

>NTDB_id=1099782 ACM530_RS11855 WP_106575669.1 2574150..2574557(+) (pilG) [Pseudomonas sp. NFX183]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1099782 ACM530_RS11855 WP_106575669.1 2574150..2574557(+) (pilG) [Pseudomonas sp. NFX183]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACGTGGGGTGCGAAGTCATCACGGCCATCGACGGTTTCGATGCACTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAAACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGCGCGATCAAGGCCTACGTGCCCGGCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7M1KEX5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659

Multiple sequence alignment