Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   ACLQ7P_RS15455 Genome accession   NZ_CP181322
Coordinates   2874582..2875328 (-) Length   248 a.a.
NCBI ID   WP_026113741.1    Uniprot ID   A0AAQ3EXH2
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2869582..2880328
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS15430 (ACLQ7P_15430) mreC 2869988..2870860 (-) 873 WP_003222609.1 rod shape-determining protein MreC -
  ACLQ7P_RS15435 (ACLQ7P_15435) mreB 2870891..2871904 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  ACLQ7P_RS15440 (ACLQ7P_15440) radC 2871996..2872691 (-) 696 WP_003246034.1 RadC family protein -
  ACLQ7P_RS15445 (ACLQ7P_15445) maf 2872728..2873297 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  ACLQ7P_RS15450 (ACLQ7P_15450) spoIIB 2873450..2874448 (-) 999 WP_095843864.1 stage II sporulation protein SpoIIB -
  ACLQ7P_RS15455 (ACLQ7P_15455) comC 2874582..2875328 (-) 747 WP_026113741.1 prepilin peptidase Machinery gene
  ACLQ7P_RS15460 (ACLQ7P_15460) folC 2875469..2876761 (-) 1293 WP_003229640.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  ACLQ7P_RS15465 (ACLQ7P_15465) valS 2876821..2879463 (-) 2643 WP_416247659.1 valine--tRNA ligase -
  ACLQ7P_RS15470 (ACLQ7P_15470) - 2879911..2880102 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26422.99 Da        Isoelectric Point: 9.7944

>NTDB_id=1099719 ACLQ7P_RS15455 WP_026113741.1 2874582..2875328(-) (comC) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPAVVFISLLIIVAVTDLHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=1099719 ACLQ7P_RS15455 WP_026113741.1 2874582..2875328(-) (comC) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGCTATCCATTCTTTTTATCTTTGGGCTTATTCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCTCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGTTTTGGCACGTCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATCTTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTCTGTTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGGGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTATATGGAGCGGCAGCCGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTTGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.194

100

0.992

Multiple sequence alignment