Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   ACLQ7P_RS08475 Genome accession   NZ_CP181322
Coordinates   1655283..1656086 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 1650283..1661086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS08455 (ACLQ7P_08455) yqxC 1650393..1651238 (+) 846 WP_003230264.1 TlyA family RNA methyltransferase -
  ACLQ7P_RS08460 (ACLQ7P_08460) argR 1651336..1651785 (+) 450 WP_003230265.1 arginine repressor ArgR -
  ACLQ7P_RS08465 (ACLQ7P_08465) recN 1651822..1653552 (+) 1731 WP_015714238.1 DNA repair protein RecN Machinery gene
  ACLQ7P_RS08470 (ACLQ7P_08470) spoIVB 1653727..1655007 (+) 1281 WP_416247473.1 SpoIVB peptidase -
  ACLQ7P_RS08475 (ACLQ7P_08475) spo0A 1655283..1656086 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  ACLQ7P_RS08480 (ACLQ7P_08480) - 1656513..1657382 (+) 870 WP_416247474.1 hypothetical protein -
  ACLQ7P_RS08485 (ACLQ7P_08485) - 1657396..1657881 (+) 486 WP_416247475.1 hypothetical protein -
  ACLQ7P_RS08490 (ACLQ7P_08490) - 1657888..1658340 (+) 453 WP_416247476.1 hypothetical protein -
  ACLQ7P_RS08495 (ACLQ7P_08495) - 1658559..1659032 (+) 474 WP_416247477.1 hypothetical protein -
  ACLQ7P_RS08500 (ACLQ7P_08500) - 1659252..1659752 (+) 501 WP_416247478.1 hypothetical protein -
  ACLQ7P_RS08505 (ACLQ7P_08505) - 1659765..1659962 (+) 198 WP_416247479.1 hypothetical protein -
  ACLQ7P_RS08510 (ACLQ7P_08510) - 1659959..1660306 (+) 348 WP_416247480.1 hypothetical protein -
  ACLQ7P_RS08515 (ACLQ7P_08515) - 1660450..1660692 (+) 243 WP_416247481.1 hypothetical protein -
  ACLQ7P_RS08520 (ACLQ7P_08520) - 1660640..1661056 (+) 417 WP_416247482.1 hypothetical protein -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=1099707 ACLQ7P_RS08475 WP_003226427.1 1655283..1656086(+) (spo0A) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1099707 ACLQ7P_RS08475 WP_003226427.1 1655283..1656086(+) (spo0A) [Bacillus subtilis subsp. subtilis strain JCK-1398]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGTCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGTCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCTACCAACAGTGAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment