Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ACLQ7P_RS07945 Genome accession   NZ_CP181322
Coordinates   1564058..1564825 (+) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 1559058..1569825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS07915 (ACLQ7P_07915) pgpH 1559355..1561490 (+) 2136 WP_072557183.1 cyclic-di-AMP phosphodiesterase PgpH -
  ACLQ7P_RS07920 (ACLQ7P_07920) ybeY 1561491..1561964 (+) 474 WP_003230039.1 rRNA maturation RNase YbeY -
  ACLQ7P_RS07925 (ACLQ7P_07925) unpK 1561945..1562316 (+) 372 WP_014480294.1 diacylglycerol kinase family protein -
  ACLQ7P_RS07930 (ACLQ7P_07930) - 1562434..1562844 (+) 411 WP_014480293.1 cytidine deaminase -
  ACLQ7P_RS07935 (ACLQ7P_07935) era 1562825..1563730 (+) 906 WP_003230051.1 GTPase Era -
  ACLQ7P_RS07940 (ACLQ7P_07940) yqzL 1563878..1564021 (+) 144 WP_003230053.1 YqzL family protein -
  ACLQ7P_RS07945 (ACLQ7P_07945) recO 1564058..1564825 (+) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  ACLQ7P_RS07950 (ACLQ7P_07950) glyQ 1565123..1566010 (+) 888 WP_121591958.1 glycine--tRNA ligase subunit alpha -
  ACLQ7P_RS07955 (ACLQ7P_07955) glyS 1566003..1568042 (+) 2040 WP_014480291.1 glycine--tRNA ligase subunit beta -
  ACLQ7P_RS07960 (ACLQ7P_07960) ccpN 1568175..1568813 (+) 639 WP_003237058.1 transcriptional regulator CcpN -
  ACLQ7P_RS07965 (ACLQ7P_07965) ppsR 1568839..1569651 (+) 813 WP_003230064.1 pyruvate, water dikinase regulatory protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=1099696 ACLQ7P_RS07945 WP_014477369.1 1564058..1564825(+) (recO) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1099696 ACLQ7P_RS07945 WP_014477369.1 1564058..1564825(+) (recO) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACTTTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAACC
AAATCCTTATTTATTTGAATTCATATTAGAATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTGAATCATTGTGTACATTGTAAGAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATCAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996

Multiple sequence alignment