Detailed information    

insolico Bioinformatically predicted

Overview


Name   nucA/comI   Type   Machinery gene
Locus tag   ACLQ7P_RS07690 Genome accession   NZ_CP181322
Coordinates   1519688..1520098 (+) Length   136 a.a.
NCBI ID   WP_009967785.1    Uniprot ID   A0A6I4D881
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1514688..1525098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS07665 (ACLQ7P_07665) queD 1515325..1515774 (+) 450 WP_003232462.1 6-carboxytetrahydropterin synthase QueD -
  ACLQ7P_RS07670 (ACLQ7P_07670) queE 1515767..1516498 (+) 732 WP_416247460.1 7-carboxy-7-deazaguanine synthase QueE -
  ACLQ7P_RS07675 (ACLQ7P_07675) queF 1516516..1517013 (+) 498 WP_003218613.1 preQ(1) synthase -
  ACLQ7P_RS07680 (ACLQ7P_07680) - 1517316..1518557 (-) 1242 WP_416247461.1 IS256-like element ISBsu2 family transposase -
  ACLQ7P_RS07685 (ACLQ7P_07685) sigK 1518765..1519493 (-) 729 WP_205589318.1 RNA polymerase sporulation sigma factor SigK -
  ACLQ7P_RS07690 (ACLQ7P_07690) nucA/comI 1519688..1520098 (+) 411 WP_009967785.1 sporulation-specific Dnase NucB Machinery gene
  ACLQ7P_RS07695 (ACLQ7P_07695) yqeB 1520131..1520853 (-) 723 WP_416247462.1 DUF308 domain-containing protein -
  ACLQ7P_RS07700 (ACLQ7P_07700) gnd 1521105..1521998 (+) 894 WP_416247463.1 phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) -
  ACLQ7P_RS07705 (ACLQ7P_07705) yqeD 1522017..1522643 (-) 627 WP_024572279.1 TVP38/TMEM64 family protein -
  ACLQ7P_RS07710 (ACLQ7P_07710) cwlH 1522830..1523582 (+) 753 Protein_1457 N-acetylmuramoyl-L-alanine amidase CwlH -
  ACLQ7P_RS07715 (ACLQ7P_07715) yqeF 1523834..1524565 (+) 732 WP_003229964.1 SGNH/GDSL hydrolase family protein -
  ACLQ7P_RS07720 (ACLQ7P_07720) - 1524869..1525009 (-) 141 WP_003226124.1 sporulation histidine kinase inhibitor Sda -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 14967.97 Da        Isoelectric Point: 5.1853

>NTDB_id=1099692 ACLQ7P_RS07690 WP_009967785.1 1519688..1520098(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1099692 ACLQ7P_RS07690 WP_009967785.1 1519688..1520098(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGAAAAAGTGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGGGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I4D881

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

62.609

84.559

0.529


Multiple sequence alignment